Commit History

update isp default mode to cls
0c99403
verified

ctheodoris commited on

update transformers version to match pretrainer using accelerate
3d62bb9
verified

ctheodoris commited on

update pretrainer to not use distributed sampler (Trainer uses accelerate)
8140c51
verified

ctheodoris commited on

update function for N_Detections for mixture_model without anchor_token
df297bc

Christina Theodoris commited on

add check to ensure emb_label is None for getting state embs dict
39b4444

Christina Theodoris commited on

change default emb to cls
9ee140a
verified

ctheodoris commited on

include install time in model card
21d36cd
verified

ctheodoris commited on

CUDA kernels incompatible with standard PyTorch device movement with 4bit/8bit, necessitating device-specific handling (#416)
b6d28c3
verified

ctheodoris madhavanvenkatesh commited on

move dict loading to function in eval utils
57bc17e

ctheodoris commited on

edit doc formatting
fce3f6e

ctheodoris commited on

edit docs formatting
ef094b2

ctheodoris commited on

add mtl_classifier to docs
bedb3b7

ctheodoris commited on

add input size tip to instructions
2732369
verified

ctheodoris commited on

update tokenizer to defaults for 95M models for special token and input size
da8cf3d
verified

ctheodoris commited on

update instructions to include reminder about token dictionary
cb1b0d5
verified

ctheodoris commited on

sync token_dictionary variable name w/ classifier
a021deb
verified

ctheodoris commited on

update setup with req and manifest with updated filenames
a34fbc2

ctheodoris commited on

fix imports mtl/eval_utils
eab1878

ctheodoris commited on

allow model_type valid options to take params model_type : {"Pretrained", "GeneClassifier", "CellClassifier", "MTLCellClassifier", "MTLCellClassifier-Quantized"} (#390)
47e0ef8
verified

ctheodoris madhavanvenkatesh commited on

comment out "def save_model_without_heads(original_model_save_directory)"; redundant for ISP/Emb extractor (#382)
22bf20f
verified

ctheodoris madhavanvenkatesh commited on

fixed bug related to dynamic ranges in dictionary with 'min' and 'max' value mismatch in optuna suggest fn (#380)
fe1640b
verified

ctheodoris madhavanvenkatesh commited on

Update README.md
11bcee7
verified

ctheodoris commited on

precommit formatting
f07bfd7

ctheodoris commited on

update with 12L and 20L i4096 gc95M models, multitask and quantiz code
933ca80

ctheodoris commited on

rename for consistency
ec19834
verified

ctheodoris commited on

delete old gene name dict
817eca2
verified

ctheodoris commited on

update to only have gene names as keys in gene_name_id_dict
e61485e
verified

ctheodoris commited on

add typing list import
42053dc

ctheodoris commited on

move dicts to init
ea428cb

ctheodoris commited on

add random state to umap
eb2a04b

ctheodoris commited on

update get_embs with token_gene_dict arg
ace12e9
verified

ctheodoris commited on

update refs to get_model_emb_dims
3fe35ba
verified

ctheodoris commited on