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Geneformer

Inference Endpoints

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Geneformer / examples

15 contributors

History: 34 commits

Christina Theodoris

add option for hyperparameter tuning to cc.validate

4bddd45 8 months ago

pretraining_new_model
Update links including unsorted example lengths file over 1 year ago
cell_classification.ipynb

106 kB

add option for hyperparameter tuning to cc.validate 8 months ago
extract_and_plot_cell_embeddings.ipynb

1.13 MB

Add classifier module and examples 9 months ago
gene_classification.ipynb

180 kB

Add classifier module and examples 9 months ago
in_silico_perturbation.ipynb

5.06 kB

Add functions for extracting gene embeddings, move state_embs_dict outside isp, fix bugs in isp about 1 year ago
tokenizing_scRNAseq_data.ipynb

3.74 kB

anndata_tokenizer (#170) about 1 year ago