etrop commited on
Commit
1575e22
1 Parent(s): 07eece4

update loading script

Browse files
Files changed (1) hide show
  1. genomics-long-range-benchmark.py +1 -2
genomics-long-range-benchmark.py CHANGED
@@ -251,7 +251,6 @@ class CagePredictionHandler(GenomicLRATaskHandler):
251
  """
252
 
253
  target_files = self.target_files_by_split[split]
254
- sequence_length = self.sequence_length
255
 
256
  key = 0
257
  coordinates_dataframe = pd.read_csv(self.coordinate_csv_file)
@@ -265,7 +264,7 @@ class CagePredictionHandler(GenomicLRATaskHandler):
265
  padded_sequence = pad_sequence(
266
  chromosome=self.reference_genome[chromosome],
267
  start=start,
268
- sequence_length=sequence_length,
269
  end=stop,
270
  )
271
 
 
251
  """
252
 
253
  target_files = self.target_files_by_split[split]
 
254
 
255
  key = 0
256
  coordinates_dataframe = pd.read_csv(self.coordinate_csv_file)
 
264
  padded_sequence = pad_sequence(
265
  chromosome=self.reference_genome[chromosome],
266
  start=start,
267
+ sequence_length=self.sequence_length,
268
  end=stop,
269
  )
270