etrop commited on
Commit
561af90
1 Parent(s): ca412e9

fix file path for causal eqtl data

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Files changed (1) hide show
  1. genomics-long-range-benchmark.py +1 -1
genomics-long-range-benchmark.py CHANGED
@@ -485,7 +485,7 @@ class VariantEffectCausalEqtl(GenomicLRATaskHandler):
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  self.reference_genome = Fasta(reference_genome_file, one_based_attributes=False)
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  self.coordinates_labels_csv_file = dl_manager.download_and_extract(
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- f"variant_effect_prediction/All_Tissues.csv"
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  )
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  return super().split_generators(dl_manager, cache_dir_root)
 
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  self.reference_genome = Fasta(reference_genome_file, one_based_attributes=False)
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  self.coordinates_labels_csv_file = dl_manager.download_and_extract(
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+ f"variant_effect_causal_eqtl/All_Tissues.csv"
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  )
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  return super().split_generators(dl_manager, cache_dir_root)