Datasets:

barma7

/

oai-t2maps-epgfit

like 0

Error code:   DatasetGenerationCastError
Exception:    DatasetGenerationCastError
Message:      An error occurred while generating the dataset

All the data files must have the same columns, but at some point there are 4 new columns ({'processing time', 'sub_id', 'status', 'message'}) and 5 missing columns ({'subject_id', 'laterality', 'visit', 't2map_nifti_path', 'dicom_mese_path'}).

This happened while the csv dataset builder was generating data using

hf://datasets/barma7/oai-t2maps-epgfit/00m/processing_log_EPG_dictionary.csv (at revision 95b92709031199d01ee2a36f689308be1de4a1db)

Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback:    Traceback (most recent call last):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1870, in _prepare_split_single
                  writer.write_table(table)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 622, in write_table
                  pa_table = table_cast(pa_table, self._schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2292, in table_cast
                  return cast_table_to_schema(table, schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2240, in cast_table_to_schema
                  raise CastError(
              datasets.table.CastError: Couldn't cast
              sub_id: int64
              status: int64
              processing time: double
              message: string
              -- schema metadata --
              pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 725
              to
              {'subject_id': Value(dtype='int64', id=None), 'visit': Value(dtype='int64', id=None), 'laterality': Value(dtype='string', id=None), 'dicom_mese_path': Value(dtype='string', id=None), 't2map_nifti_path': Value(dtype='string', id=None)}
              because column names don't match
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1400, in compute_config_parquet_and_info_response
                  parquet_operations, partial, estimated_dataset_info = stream_convert_to_parquet(
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 983, in stream_convert_to_parquet
                  builder._prepare_split(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1741, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1872, in _prepare_split_single
                  raise DatasetGenerationCastError.from_cast_error(
              datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
              
              All the data files must have the same columns, but at some point there are 4 new columns ({'processing time', 'sub_id', 'status', 'message'}) and 5 missing columns ({'subject_id', 'laterality', 'visit', 't2map_nifti_path', 'dicom_mese_path'}).
              
              This happened while the csv dataset builder was generating data using
              
              hf://datasets/barma7/oai-t2maps-epgfit/00m/processing_log_EPG_dictionary.csv (at revision 95b92709031199d01ee2a36f689308be1de4a1db)
              
              Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)