diff --git a/BeetleMeasurements.csv b/BeetleMeasurements.csv index 242871051b4888d4f3d77449bced345396bacb01..54cfed9eca7231bd699e2e23392cb13437dd8d8f 100644 --- a/BeetleMeasurements.csv +++ b/BeetleMeasurements.csv @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:ec48f53cf092121be66e041afc3a4c9c2101a1d133755bb37da0333799931f55 -size 16156835 +oid sha256:b5ce8f2354a129a0f6b4db864dadd4394e865f6091cac353845eba86987a32de +size 19544989 diff --git a/README.md b/README.md index 88fa8b265aa74952acfd23d3957c70485667e9a9..0ae35579ffe449a7808c9cda38ab82fa32eedee4 100644 --- a/README.md +++ b/README.md @@ -104,7 +104,7 @@ The `individual_images` directory contains images of each individual segmented f The `group_images` folder has all 577 orignal full size images. The `beetle_images_resized` folder has the resized (approximately 1MB) images used for annotation in Zooniverse (1MB was the size limitation imposed by the software); aspect ratio was maintained in the resize. -Segmentation was completed by adapting the elytra length and width annotations to generate expected bounding boxes. [Segment Anything (SAM)]() was then used to segment the individual beetles. More information and the code for this process is provided in the [Imageomics/2018-NEON-beetles-processing repo](https://github.com/Imageomics/2018-NEON-beetles-processing). +Segmentation was completed by adapting the elytra length and width annotations to generate the xy point input for the [Segment Anything (SAM)]() model. [Segment Anything (SAM)]() was then used to segment the individual beetles. More information and the code for this process is provided in the [Imageomics/2018-NEON-beetles-processing repo](https://github.com/Imageomics/2018-NEON-beetles-processing). |![picture of beetles in A00000046094](https://huggingface.co/datasets/imageomics/BeetlePalooza/resolve/main/group_images/A00000046094.jpg)| diff --git a/group_images_masks/A00000001831_mask.png b/group_images_masks/A00000001831_mask.png new file mode 100644 index 0000000000000000000000000000000000000000..9c540e10190b4a06e098372272cca2f1e6619868 --- /dev/null +++ b/group_images_masks/A00000001831_mask.png @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fc4ddeb46758f50ce967375e2b5cd0c51f4049904d621a2dafdbf5de27c624de +size 104905 diff --git a/group_images_masks/A00000003356_mask.png b/group_images_masks/A00000003356_mask.png new file mode 100644 index 0000000000000000000000000000000000000000..bca89049a9af334e009758ffa67e4d917bd82d82 --- /dev/null +++ b/group_images_masks/A00000003356_mask.png 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