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README.md
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---
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task_categories:
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- image-classification
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tags:
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- butterfly
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- heliconius
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- dorsal
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- ventral
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- RGB
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- full body
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- separated wings
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- mimicry
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- CV
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pretty_name: Meier Subset of Jiggins Data
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size_categories:
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- 10K<n<100K
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---
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# Dataset Card for Meier Subset of Jiggins Data
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## Dataset Description
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- **Homepage:**
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- **Repository:**
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- **Paper:**
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- **Leaderboard:**
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- **Point of Contact:**
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### Dataset Summary
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Subset of the collection records from the research group of Chris Jiggins at the University of Cambridge derived from almost 20 years of field studies.
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This subset contains approximately 34,000 RGB images across all Heliconius. Many records include images as well as locality data.
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All detached wings were photographed with a DSLR camera with a 100 mm macro-lens in standardized conditions; images and full records with data are stored in the [EarthCape database](https://heliconius.ecdb.io/default.aspx) and on [Zenodo](https://doi.org/10.5281/zenodo.4289223).
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Both dorsal and ventral images available. Contains both whole butterfly, and 4 wings separate. Large variation in image content.
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<!---
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This dataset card aims to be a base template for new datasets. It has been generated using [this raw template](https://github.com/huggingface/huggingface_hub/blob/main/src/huggingface_hub/templates/datasetcard_template.md?plain=1).
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--->
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### Supported Tasks and Leaderboards
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[More Information Needed]
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### Languages
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[More Information Needed]
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## Dataset Structure
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* **Jiggins_Zenodo_Img_Master.csv:** Information for the approximately 34,000 unprocessed image files included in the Jiggins Heliconius Collection.
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* To access the images combine columns `zenodo_link` and `Image_name`:
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```
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zenodo_link + '/files/' + Image_name
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```
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### Data Instances
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Multiple species of Heliconius including erato and melpomene.
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Detached wings in four quadrants (generally).
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Some subspecies may be photographed differently, needs segmentation preprocessing.
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* **Type:** JPG/jpg/tif(very few)
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* **Size (x pixels by y pixels):** Unknown yet
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* **Background (color or none):** multiple (needs to be normalised)
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* **Fit in frame:**
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* **Ruler or Scale:** Some with Ruler
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* **Color (ColorChecker, white-balance, None):** None
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#### Preprocessing steps (to be done):
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1. Hybrid separation - some images labeled as H.erato and H. melpomene without subspecies names are hybrids and need to be determined what subspecies they are.
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2. Label correction - along with step 1.
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3. Removal of subspecies with no mimic pairs.
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4. Segmentation of four wings from images so we can focus on forewings vs hindwings: [WingSeg](https://github.com/agporto/WingSeg).
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Current preprocessing steps: [WingSeg](https://github.com/agporto/WingSeg) on the [Meier subset](https://huggingface.co/datasets/imageomics/Meier-Subset-Jiggins/).
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### Data Fields
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[More Information Needed]
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### Data Splits
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[More Information Needed]
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## Dataset Creation
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### Curation Rationale
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[More Information Needed]
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### Source Data
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Image subset of the [collection records](https://doi.org/10.5281/zenodo.4289222) from the research group of Chris Jiggins at the University of Cambridge derived from almost 20 years of field studies.
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#### Initial Data Collection and Normalization
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[More Information Needed]
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#### Who are the source language producers?
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[More Information Needed]
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### Annotations
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#### Annotation process
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[More Information Needed]
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#### Who are the annotators?
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[More Information Needed]
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### Personal and Sensitive Information
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None
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## Considerations for Using the Data
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### Social Impact of Dataset
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[More Information Needed]
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### Discussion of Biases
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[More Information Needed]
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### Other Known Limitations
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[More Information Needed]
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## Additional Information
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### Dataset Curators
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* Christopher Lawrence (Princeton University) - ORCID: 0000-0002-3846-5968
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* Chris Jiggins (University of Cambridge) - ORCID: 0000-0002-7809-062X
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* Butterfly Genetics Group (University of Cambridge)
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### Licensing Information
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[More Information Needed]
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### Citation Information
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Christopher Lawrence, Chris Jiggins, Butterfly Genetics Group (University of Cambridge). (2023). Jiggins_Heliconius_Collection. Hugging Face. https://huggingface.co/datasets/imageomics/Meier-Subset-Jiggins.
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If you use this dataset, please cite the original dataset (citation below) as well as this curated subset.
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Gabriela Montejo-Kovacevich, Eva van der Heijden, Nicola Nadeau, & Chris Jiggins. (2020). Cambridge butterfly wing collection batch 10. Zenodo. https://doi.org/10.5281/zenodo.4289223
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### Contributions
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The [Imageomics Institute](https://imageomics.org) is funded by the US National Science Foundation's Harnessing the Data Revolution (HDR) Institute program under [Award #2118240](https://www.nsf.gov/awardsearch/showAward?AWD_ID=2118240) (Imageomics: A New Frontier of Biological Information Powered by Knowledge-Guided Machine Learning).
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