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e28185c
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  1. README.md +19 -2
  2. breast.py +11 -17
README.md CHANGED
@@ -5,7 +5,7 @@ tags:
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  - breast
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  - tabular_classification
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  - binary_classification
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- pretty_name: Bank
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  size_categories:
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  - 100<n<1K
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  task_categories: # Full list at https://github.com/huggingface/hub-docs/blob/main/js/src/lib/interfaces/Types.ts
@@ -14,4 +14,21 @@ configs:
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  - cancer
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  ---
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  # Breast cancer
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- The [Breast cancer dataset](https://archive.ics.uci.edu/ml/datasets/Breast+Cancer+Wisconsin+%28Original%29) is cool.
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  - breast
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  - tabular_classification
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  - binary_classification
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+ pretty_name: Breast
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  size_categories:
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  - 100<n<1K
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  task_categories: # Full list at https://github.com/huggingface/hub-docs/blob/main/js/src/lib/interfaces/Types.ts
 
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  - cancer
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  ---
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  # Breast cancer
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+ The [Breast cancer dataset](https://archive.ics.uci.edu/ml/datasets/Breast+Cancer+Wisconsin+%28Original%29) from the [UCI ML repository](https://archive.ics.uci.edu/ml/datasets).
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+
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+ # Configurations and tasks
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+ - `cancer` Binary classification task to classify the cell clump as cancerous or not.
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+
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+ # Features
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+ | **Name** |**Type**|**Description** |
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+ |-------------------------------|--------|----------------------------|
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+ |`clump_thickness` |`int8` |Thickness of the clump |
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+ |`uniformity_of_cell_size` |`int8` |Uniformity of cell size |
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+ |`uniformity_of_cell_shape` |`int8` |Uniformity of cell shape |
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+ |`marginal_adhesion` |`int8` |Marginal adhesion |
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+ |`single_epithelial_cell_size` |`int8` |single_epithelial_cell_size |
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+ |`bare_nuclei` |`int8` |bare_nuclei |
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+ |`bland_chromatin` |`int8` |bland_chromatin |
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+ |`normal_nucleoli` |`int8` |normal_nucleoli |
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+ |`mitoses` |`int8` |mitoses |
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+ |`is_cancer` |`int8` |Is the clump cancer |
breast.py CHANGED
@@ -55,12 +55,6 @@ urls_per_split = {
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  "train": "https://huggingface.co/datasets/mstz/breast/raw/main/breast-cancer-wisconsin.data",
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  }
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  features_types_per_config = {
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- "encoding": {
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- "feature": datasets.Value("string"),
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- "original_value": datasets.Value("string"),
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- "encoded_value": datasets.Value("int8"),
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- },
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-
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  "cancer": {
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  "clump_thickness": datasets.Value("int8"),
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  "uniformity_of_cell_size": datasets.Value("int8"),
@@ -93,10 +87,7 @@ class Breast(datasets.GeneratorBasedBuilder):
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  ]
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- def _info(self):
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- if self.config.name not in features_per_config:
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- raise ValueError(f"Unknown configuration: {self.config.name}")
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-
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  info = datasets.DatasetInfo(description=DESCRIPTION, citation=_CITATION, homepage=_HOMEPAGE,
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  features=features_per_config[self.config.name])
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@@ -110,19 +101,22 @@ class Breast(datasets.GeneratorBasedBuilder):
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  ]
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  def _generate_examples(self, filepath: str):
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- data = pandas.read_csv(filepath, header=None)
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- data.columns=_ORIGINAL_FEATURE_NAMES
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- data = self.preprocess(data, config=self.config.name)
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- for row_id, row in data.iterrows():
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- data_row = dict(row)
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- yield row_id, data_row
 
 
 
 
 
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  def preprocess(self, data: pandas.DataFrame, config: str = "cancer") -> pandas.DataFrame:
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  data.drop("id", axis="columns", inplace=True)
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- print(data.dtypes)
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  data = data[data.bare_nuclei != "?"]
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  for c in data.columns:
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  data.loc[:, c] = data[c].astype(int)
 
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  "train": "https://huggingface.co/datasets/mstz/breast/raw/main/breast-cancer-wisconsin.data",
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  }
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  features_types_per_config = {
 
 
 
 
 
 
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  "cancer": {
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  "clump_thickness": datasets.Value("int8"),
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  "uniformity_of_cell_size": datasets.Value("int8"),
 
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  ]
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+ def _info(self):
 
 
 
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  info = datasets.DatasetInfo(description=DESCRIPTION, citation=_CITATION, homepage=_HOMEPAGE,
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  features=features_per_config[self.config.name])
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  ]
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  def _generate_examples(self, filepath: str):
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+ if self.config.name == "cancer":
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+ data = pandas.read_csv(filepath, header=None)
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+ data.columns=_ORIGINAL_FEATURE_NAMES
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+ data = self.preprocess(data, config=self.config.name)
 
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+ for row_id, row in data.iterrows():
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+ data_row = dict(row)
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+
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+ yield row_id, data_row
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+ else:
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+ raise ValueError(f"Unknown config: {self.config.name}")
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  def preprocess(self, data: pandas.DataFrame, config: str = "cancer") -> pandas.DataFrame:
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  data.drop("id", axis="columns", inplace=True)
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  data = data[data.bare_nuclei != "?"]
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  for c in data.columns:
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  data.loc[:, c] = data[c].astype(int)