jialicheng
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Commit
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Browse files- README.md +68 -0
- all_results.json +20 -0
- config.json +42 -0
- eval_results.json +9 -0
- model.safetensors +3 -0
- pred_logit_eval.npy +3 -0
- pred_logit_test.npy +3 -0
- pred_logit_train.npy +3 -0
- runs/Apr26_22-36-10_clu/events.out.tfevents.1714170981.clu +3 -0
- runs/Apr26_22-36-10_clu/events.out.tfevents.1714172415.clu +3 -0
- runs/Apr27_01-37-49_clu/events.out.tfevents.1714181882.clu +3 -0
- runs/Apr27_01-37-49_clu/events.out.tfevents.1714183314.clu +3 -0
- special_tokens_map.json +7 -0
- test_results.json +9 -0
- tokenizer.json +0 -0
- tokenizer_config.json +57 -0
- train_results.json +9 -0
- trainer_state.json +169 -0
- training_args.bin +3 -0
- vocab.txt +0 -0
README.md
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---
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base_model: dmis-lab/biobert-v1.1
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tags:
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- generated_from_trainer
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metrics:
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- accuracy
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model-index:
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- name: ddi_42
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results: []
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---
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<!-- This model card has been generated automatically according to the information the Trainer had access to. You
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should probably proofread and complete it, then remove this comment. -->
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# ddi_42
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This model is a fine-tuned version of [dmis-lab/biobert-v1.1](https://huggingface.co/dmis-lab/biobert-v1.1) on the None dataset.
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It achieves the following results on the evaluation set:
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- Loss: 0.2816
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- Accuracy: 0.9535
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## Model description
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More information needed
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## Intended uses & limitations
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More information needed
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## Training and evaluation data
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More information needed
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## Training procedure
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### Training hyperparameters
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The following hyperparameters were used during training:
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- learning_rate: 5e-05
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- train_batch_size: 32
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- eval_batch_size: 256
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- seed: 42
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- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
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- lr_scheduler_type: linear
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- num_epochs: 10
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### Training results
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| Training Loss | Epoch | Step | Validation Loss | Accuracy |
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|:-------------:|:-----:|:----:|:---------------:|:--------:|
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| No log | 1.0 | 791 | 0.1755 | 0.9411 |
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| 0.2029 | 2.0 | 1582 | 0.1931 | 0.9495 |
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| 0.0749 | 3.0 | 2373 | 0.2716 | 0.9475 |
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| 0.0442 | 4.0 | 3164 | 0.2566 | 0.9515 |
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| 0.0442 | 5.0 | 3955 | 0.2816 | 0.9535 |
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| 0.0249 | 6.0 | 4746 | 0.3136 | 0.9471 |
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| 0.0135 | 7.0 | 5537 | 0.3219 | 0.9475 |
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| 0.0102 | 8.0 | 6328 | 0.3054 | 0.9503 |
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| 0.006 | 9.0 | 7119 | 0.3304 | 0.9515 |
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| 0.006 | 10.0 | 7910 | 0.3346 | 0.9507 |
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### Framework versions
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- Transformers 4.39.3
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- Pytorch 2.2.2+cu118
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- Datasets 2.18.0
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- Tokenizers 0.15.2
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all_results.json
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{
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"epoch": 10.0,
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"eval_accuracy": 0.9535256410256411,
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"eval_loss": 0.2816075086593628,
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"eval_runtime": 4.6959,
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"eval_samples": 25296,
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"eval_samples_per_second": 531.522,
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"eval_steps_per_second": 2.129,
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"test_accuracy": 0.943666899930021,
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"test_loss": 0.35502904653549194,
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"test_runtime": 9.8103,
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"test_samples_per_second": 582.65,
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"test_steps_per_second": 2.344,
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"train_accuracy": 0.9965211891208097,
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"train_loss": 0.013760130852460861,
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"train_runtime": 40.2929,
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"train_samples": 25296,
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"train_samples_per_second": 627.803,
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"train_steps_per_second": 2.457
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}
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config.json
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{
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"_name_or_path": "dmis-lab/biobert-v1.1",
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"architectures": [
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"BertForSequenceClassification"
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],
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"attention_probs_dropout_prob": 0.1,
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"classifier_dropout": null,
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"finetuning_task": "text-classification",
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"gradient_checkpointing": false,
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.1,
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"hidden_size": 768,
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"id2label": {
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"0": "LABEL_0",
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"1": "LABEL_1",
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"2": "LABEL_2",
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"3": "LABEL_3",
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"4": "LABEL_4"
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},
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"initializer_range": 0.02,
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"intermediate_size": 3072,
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"label2id": {
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"0": 0,
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"1": 1,
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"2": 2,
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"3": 3,
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"4": 4
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},
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"layer_norm_eps": 1e-12,
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"max_position_embeddings": 512,
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"model_type": "bert",
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"num_attention_heads": 12,
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"num_hidden_layers": 12,
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"pad_token_id": 0,
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"position_embedding_type": "absolute",
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"problem_type": "single_label_classification",
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"torch_dtype": "float32",
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"transformers_version": "4.39.3",
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"type_vocab_size": 2,
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"use_cache": true,
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"vocab_size": 28996
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}
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eval_results.json
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{
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"epoch": 10.0,
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"eval_accuracy": 0.9535256410256411,
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"eval_loss": 0.2816075086593628,
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"eval_runtime": 4.6959,
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"eval_samples": 2496,
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"eval_samples_per_second": 531.522,
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"eval_steps_per_second": 2.129
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}
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model.safetensors
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version https://git-lfs.github.com/spec/v1
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oid sha256:e487188e605f5d213dc922ba1bdf83cdd516b55c0b7189ab96b3430d54598d6e
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size 433279996
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pred_logit_eval.npy
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version https://git-lfs.github.com/spec/v1
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size 50048
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pred_logit_test.npy
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version https://git-lfs.github.com/spec/v1
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size 114448
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pred_logit_train.npy
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version https://git-lfs.github.com/spec/v1
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size 506048
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runs/Apr26_22-36-10_clu/events.out.tfevents.1714170981.clu
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version https://git-lfs.github.com/spec/v1
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size 9971
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runs/Apr26_22-36-10_clu/events.out.tfevents.1714172415.clu
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version https://git-lfs.github.com/spec/v1
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size 1044
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runs/Apr27_01-37-49_clu/events.out.tfevents.1714181882.clu
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version https://git-lfs.github.com/spec/v1
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size 9971
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runs/Apr27_01-37-49_clu/events.out.tfevents.1714183314.clu
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version https://git-lfs.github.com/spec/v1
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size 1044
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special_tokens_map.json
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{
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"cls_token": "[CLS]",
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"mask_token": "[MASK]",
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"unk_token": "[UNK]"
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}
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test_results.json
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{
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"epoch": 10.0,
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"eval_samples": 5716,
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"test_accuracy": 0.943666899930021,
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"test_loss": 0.35502904653549194,
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"test_runtime": 9.8103,
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"test_samples_per_second": 582.65,
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"test_steps_per_second": 2.344
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}
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tokenizer.json
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tokenizer_config.json
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{
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"added_tokens_decoder": {
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"0": {
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"content": "[PAD]",
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"lstrip": false,
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"special": true
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},
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"100": {
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"content": "[UNK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"101": {
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"content": "[CLS]",
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"102": {
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"content": "[SEP]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"103": {
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"content": "[MASK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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}
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},
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"clean_up_tokenization_spaces": true,
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"cls_token": "[CLS]",
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"do_basic_tokenize": true,
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"do_lower_case": false,
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"mask_token": "[MASK]",
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"model_max_length": 512,
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"never_split": null,
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"strip_accents": null,
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"tokenize_chinese_chars": true,
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"tokenizer_class": "BertTokenizer",
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"unk_token": "[UNK]"
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}
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train_results.json
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{
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"epoch": 10.0,
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"eval_samples": 25296,
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"train_accuracy": 0.9965211891208097,
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"train_loss": 0.013760130852460861,
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"train_runtime": 40.2929,
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"train_samples_per_second": 627.803,
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"train_steps_per_second": 2.457
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}
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trainer_state.json
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vocab.txt
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