update to use monai 1.0.1
Browse files- configs/metadata.json +4 -3
- docs/readme.md +1 -1
configs/metadata.json
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@@ -1,14 +1,15 @@
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{
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"schema": "https://github.com/Project-MONAI/MONAI-extra-test-data/releases/download/0.8.1/meta_schema_20220324.json",
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"version": "0.2.
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"changelog": {
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"0.2.1": "enhance readme on commands example",
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"0.2.0": "update license files",
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"0.1.0": "complete the first version model package",
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"0.0.1": "initialize the model package structure"
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},
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"monai_version": "1.0.
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"pytorch_version": "1.
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"numpy_version": "1.22.4",
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"optional_packages_version": {
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"nibabel": "4.0.1",
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{
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"schema": "https://github.com/Project-MONAI/MONAI-extra-test-data/releases/download/0.8.1/meta_schema_20220324.json",
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"version": "0.2.2",
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"changelog": {
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"0.2.2": "update to use monai 1.0.1",
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"0.2.1": "enhance readme on commands example",
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"0.2.0": "update license files",
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"0.1.0": "complete the first version model package",
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"0.0.1": "initialize the model package structure"
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},
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"monai_version": "1.0.1",
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"pytorch_version": "1.13.0",
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"numpy_version": "1.22.4",
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"optional_packages_version": {
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"nibabel": "4.0.1",
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docs/readme.md
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@@ -6,7 +6,7 @@ This model is trained using the SEResNet50 structure, whose details can be found
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The [pytorch model](https://drive.google.com/file/d/14CS-s1uv2q6WedYQGeFbZeEWIkoyNa-x/view?usp=sharing) and [torchscript model](https://drive.google.com/file/d/1fOoJ4n5DWKHrt9QXTZ2sXwr9C-YvVGCM/view?usp=sharing) are shared in google drive. Modify the "bundle_root" parameter specified in configs/train.json and configs/inference.json to reflect where models are downloaded. Expected directory path to place downloaded models is "models/" under "bundle_root".
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## Data
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Datasets used in this work were provided by [Activ Surgical](https://www.activsurgical.com/). Here is a [link](https://
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The input label json should be a list made up by dicts which includes "image" and "label" keys. An example format is shown below.
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The [pytorch model](https://drive.google.com/file/d/14CS-s1uv2q6WedYQGeFbZeEWIkoyNa-x/view?usp=sharing) and [torchscript model](https://drive.google.com/file/d/1fOoJ4n5DWKHrt9QXTZ2sXwr9C-YvVGCM/view?usp=sharing) are shared in google drive. Modify the "bundle_root" parameter specified in configs/train.json and configs/inference.json to reflect where models are downloaded. Expected directory path to place downloaded models is "models/" under "bundle_root".
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## Data
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Datasets used in this work were provided by [Activ Surgical](https://www.activsurgical.com/). Here is a [link](https://github.com/Project-MONAI/MONAI-extra-test-data/releases/download/0.8.1/inbody_outbody_samples.zip) of 20 samples (10 in-body and 10 out-body) to show what this dataset looks like. Modify the "dataset_dir" parameter specified in configs/train.json and configs/inference.json to reflect where the data is.
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The input label json should be a list made up by dicts which includes "image" and "label" keys. An example format is shown below.
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