monsoon-nlp
commited on
Commit
•
5726e08
1
Parent(s):
3e20386
Update README.md
Browse files
README.md
CHANGED
@@ -1,22 +1,41 @@
|
|
1 |
---
|
2 |
language:
|
3 |
- en
|
4 |
-
license:
|
5 |
tags:
|
6 |
- text-generation-inference
|
7 |
-
- transformers
|
8 |
- unsloth
|
9 |
- llama
|
10 |
- trl
|
|
|
11 |
base_model: gradientai/Llama-3-8B-Instruct-262k
|
12 |
---
|
13 |
|
14 |
-
#
|
15 |
|
16 |
-
|
17 |
-
|
18 |
-
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
19 |
|
20 |
This llama model was trained 2x faster with [Unsloth](https://github.com/unslothai/unsloth) and Huggingface's TRL library.
|
21 |
|
22 |
-
|
|
|
|
|
|
1 |
---
|
2 |
language:
|
3 |
- en
|
4 |
+
license: llama3
|
5 |
tags:
|
6 |
- text-generation-inference
|
|
|
7 |
- unsloth
|
8 |
- llama
|
9 |
- trl
|
10 |
+
- dna
|
11 |
base_model: gradientai/Llama-3-8B-Instruct-262k
|
12 |
---
|
13 |
|
14 |
+
# llama3-dnapretrain-kaniwa
|
15 |
|
16 |
+
This is a LoRA adapter.
|
17 |
+
|
18 |
+
The base model is the longer-context LLaMA-3-8b-Instruct developed by Gradient and Crusoe: `gradientai/Llama-3-8B-Instruct-262k`
|
19 |
+
|
20 |
+
The dataset was part of BYU's 2019 kaniwa (*Chenopodium pallidicaule*) genome, from https://genomevolution.org/coge/GenomeInfo.pl?gid=53872
|
21 |
+
|
22 |
+
The adapter was finetuned for 3 hours on an A100. The data was split into ~20k nucleotide snippets with an Alpaca like message format.
|
23 |
+
|
24 |
+
Training Notebook: https://colab.research.google.com/drive/1XZcCYGFQGtz3_AKSR4F67WYXl6DIwP4R
|
25 |
+
|
26 |
+
Sample message:
|
27 |
+
```
|
28 |
+
Write information about the nucleotide sequence.
|
29 |
+
|
30 |
+
### Sequence:
|
31 |
+
GCCTATAGTGTGTAGCTAATGAGCCTAGGTTATCGACCCTAATCT...
|
32 |
+
|
33 |
+
### Annotation:
|
34 |
+
Information about location in the kaniwa chromosome: >lcl|Cp5
|
35 |
+
```
|
36 |
|
37 |
This llama model was trained 2x faster with [Unsloth](https://github.com/unslothai/unsloth) and Huggingface's TRL library.
|
38 |
|
39 |
+
**Genome Citation**
|
40 |
+
|
41 |
+
Mangelson H, et al. The genome of *Chenopodium pallidicaule*: an emerging Andean super grain. Appl. Plant Sci. 2019;7:e11300. doi: 10.1002/aps3.11300
|