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feat: fork biomed leaderboard
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import gradio as gr
import pandas as pd
from apscheduler.schedulers.background import BackgroundScheduler
from src.display.css_html_js import custom_css
from src.display.about import (
CITATION_BUTTON_LABEL,
CITATION_BUTTON_TEXT,
EVALUATION_QUEUE_TEXT,
INTRODUCTION_TEXT,
LLM_BENCHMARKS_TEXT,
LLM_BENCHMARKS_DETAILS,
FAQ_TEXT,
TITLE,
)
from src.display.utils import (
BENCHMARK_COLS,
COLS,
EVAL_COLS,
EVAL_TYPES,
NUMERIC_INTERVALS,
TYPES,
AutoEvalColumn,
ModelType,
fields,
WeightType,
Precision
)
from src.populate import get_evaluation_queue_df, get_leaderboard_df
from src.envs import API, EVAL_REQUESTS_PATH, EVAL_RESULTS_PATH, H4_TOKEN, IS_PUBLIC, QUEUE_REPO, REPO_ID, RESULTS_REPO
from src.submission.submit import add_new_eval
from src.display.utils import Tasks
from huggingface_hub import snapshot_download
## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## -------
def restart_space():
API.restart_space(repo_id=REPO_ID, token=H4_TOKEN)
def ui_snapshot_download(repo_id, local_dir, repo_type, tqdm_class, etag_timeout):
try:
print(f"local_dir for snapshot download = {local_dir}")
snapshot_download(repo_id=repo_id, local_dir=local_dir, repo_type=repo_type, tqdm_class=tqdm_class, etag_timeout=etag_timeout)
except Exception:
print(f"ui_snapshot_download failed. restarting space...")
restart_space()
# Searching and filtering
def update_table(hidden_df: pd.DataFrame, columns: list, type_query: list, precision_query: list, size_query: list, query: str):
print(f"hidden_df = {hidden_df}")
show_deleted = True
filtered_df = filter_models(hidden_df, type_query, size_query, precision_query, show_deleted)
print(f"filtered_df = {filtered_df}")
filtered_df = filter_queries(query, filtered_df)
df = select_columns(filtered_df, columns)
print(f"df = {df}")
return df
def search_table(df: pd.DataFrame, query: str) -> pd.DataFrame:
return df[(df[AutoEvalColumn.dummy.name].str.contains(query, case=False))]
def select_columns(df: pd.DataFrame, columns: list) -> pd.DataFrame:
always_here_cols = [
AutoEvalColumn.model_type_symbol.name,
AutoEvalColumn.model.name,
]
# We use COLS to maintain sorting
filtered_df = df[
always_here_cols + [c for c in COLS if c in df.columns and c in columns] + [AutoEvalColumn.dummy.name]
]
return filtered_df
def filter_queries(query: str, filtered_df: pd.DataFrame):
final_df = []
if query != "":
queries = [q.strip() for q in query.split(";")]
for _q in queries:
_q = _q.strip()
if _q != "":
temp_filtered_df = search_table(filtered_df, _q)
if len(temp_filtered_df) > 0:
final_df.append(temp_filtered_df)
if len(final_df) > 0:
filtered_df = pd.concat(final_df)
filtered_df = filtered_df.drop_duplicates(
subset=[AutoEvalColumn.model.name, AutoEvalColumn.precision.name, AutoEvalColumn.revision.name]
)
return filtered_df
def filter_models(df: pd.DataFrame, type_query: list, size_query: list, precision_query: list, show_deleted: bool) -> pd.DataFrame:
print(f"filter_models()'s df: {df}\n")
# Show all models
if show_deleted:
filtered_df = df
else: # Show only still on the hub models
filtered_df = df[df[AutoEvalColumn.still_on_hub.name] is True]
type_emoji = [t[0] for t in type_query]
filtered_df = filtered_df.loc[df[AutoEvalColumn.model_type_symbol.name].isin(type_emoji)]
filtered_df = filtered_df.loc[df[AutoEvalColumn.precision.name].isin(precision_query + ["None"])]
numeric_interval = pd.IntervalIndex(sorted([NUMERIC_INTERVALS[s] for s in size_query]))
params_column = pd.to_numeric(df[AutoEvalColumn.params.name], errors="coerce")
mask = params_column.apply(lambda x: any(numeric_interval.contains(x)))
filtered_df = filtered_df.loc[mask]
return filtered_df
## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## ------- ## -------
ui_snapshot_download(repo_id=QUEUE_REPO, local_dir=EVAL_REQUESTS_PATH, repo_type="dataset", tqdm_class=None, etag_timeout=30)
ui_snapshot_download(repo_id=RESULTS_REPO, local_dir=EVAL_RESULTS_PATH, repo_type="dataset", tqdm_class=None, etag_timeout=30)
print(f"COLS = {COLS}")
raw_data, original_df = get_leaderboard_df(EVAL_RESULTS_PATH, EVAL_REQUESTS_PATH, COLS, BENCHMARK_COLS) # k the problem is that the results are only saved in _bk dirs.
leaderboard_df = original_df.copy()
print(f"leaderboard_df = {leaderboard_df}")
################################################################################################################################
demo = gr.Blocks(css=custom_css)
with demo:
gr.HTML(TITLE)
gr.Markdown(INTRODUCTION_TEXT, elem_classes="markdown-text")
with gr.Tabs(elem_classes="tab-buttons") as tabs:
# toggle break 1: this tab just RENDERS existing result files on remote repo.
with gr.TabItem("Benchmarks", elem_id="llm-benchmark-tab-table", id=0):
with gr.Row():
with gr.Column():
with gr.Row():
search_bar = gr.Textbox(placeholder=" 🔍 Model search (separate multiple queries with `;`)", show_label=False, elem_id="search-bar",)
with gr.Row():
shown_columns = gr.CheckboxGroup(
choices=[
c.name
for c in fields(AutoEvalColumn)
if not c.hidden and not c.never_hidden and not c.dummy
],
value=[
c.name
for c in fields(AutoEvalColumn)
if c.displayed_by_default and not c.hidden and not c.never_hidden
],
label="Select columns to show",
elem_id="column-select",
interactive=True,
)
with gr.Column(min_width=320):
filter_columns_type = gr.CheckboxGroup(
label="Model types",
choices=[t.to_str() for t in ModelType],
value=[t.to_str() for t in ModelType],
interactive=True,
elem_id="filter-columns-type",
)
filter_columns_precision = gr.CheckboxGroup(
label="Precision",
choices=[i.value.name for i in Precision],
value=[i.value.name for i in Precision],
interactive=True,
elem_id="filter-columns-precision",
)
filter_columns_size = gr.CheckboxGroup(
label="Model sizes (in billions of parameters)",
choices=list(NUMERIC_INTERVALS.keys()),
value=list(NUMERIC_INTERVALS.keys()),
interactive=True,
elem_id="filter-columns-size",
)
# leaderboard_table = gr.components.Dataframe(
# value=leaderboard_df[
# [c.name for c in fields(AutoEvalColumn) if c.never_hidden]
# + shown_columns.value
# + [AutoEvalColumn.dummy.name]
# ] if leaderboard_df.empty is False else leaderboard_df,
# headers=[c.name for c in fields(AutoEvalColumn) if c.never_hidden] + shown_columns.value,
# datatype=TYPES,
# elem_id="leaderboard-table",
# interactive=False,
# visible=True,
# column_widths=["2%", "20%"]
# )
leaderboard_table = gr.components.Dataframe(
# value=leaderboard_df,
value=leaderboard_df[
[c.name for c in fields(AutoEvalColumn) if c.never_hidden]
+ shown_columns.value
+ [AutoEvalColumn.dummy.name]
] if leaderboard_df.empty is False else leaderboard_df,
headers=[c.name for c in fields(AutoEvalColumn) if c.never_hidden] + shown_columns.value,
datatype=TYPES,
elem_id="leaderboard-table",
interactive=False,
visible=True,
# column_widths=["2%", "20%"]
)
# Dummy leaderboard for handling the case when the user uses backspace key
hidden_leaderboard_table_for_search = gr.components.Dataframe(
value=original_df[COLS] if original_df.empty is False else original_df,
headers=COLS,
datatype=TYPES,
visible=False
)
for selector in [shown_columns, filter_columns_type, filter_columns_precision, filter_columns_size]:
selector.change(
update_table,
[
hidden_leaderboard_table_for_search,
shown_columns,
filter_columns_type,
filter_columns_precision,
filter_columns_size,
search_bar,
],
leaderboard_table,
queue=True,
)
# toggle break 2: Submission -> runs add_new_eval() (actual evaluation is done on backend when backend-cli.py is run.)
with gr.TabItem("🚀 Submit here! ", elem_id="llm-benchmark-tab-table", id=3):
# with gr.Column():
# with gr.Row():
# gr.Markdown(EVALUATION_QUEUE_TEXT, elem_classes="markdown-text")
# with gr.Column():
# with gr.Accordion(
# f"✅ Finished Evaluations ({len(finished_eval_queue_df)})",
# open=False,
# ):
# with gr.Row():
# finished_eval_table = gr.components.Dataframe(
# value=finished_eval_queue_df,
# headers=EVAL_COLS,
# datatype=EVAL_TYPES,
# row_count=5
# )
# with gr.Accordion(
# f"🔄 Running Evaluation Queue ({len(running_eval_queue_df)})",
# open=False,
# ):
# with gr.Row():
# running_eval_table = gr.components.Dataframe(
# value=running_eval_queue_df,
# headers=EVAL_COLS,
# datatype=EVAL_TYPES,
# row_count=5
# )
# with gr.Accordion(
# f"⏳ Pending Evaluation Queue ({len(pending_eval_queue_df)})",
# open=False,
# ):
# with gr.Row():
# pending_eval_table = gr.components.Dataframe(
# value=pending_eval_queue_df,
# headers=EVAL_COLS,
# datatype=EVAL_TYPES,
# row_count=5
# )
with gr.Row():
gr.Markdown("# ✉️✨ Submit your model here!", elem_classes="markdown-text")
with gr.Row():
with gr.Column():
model_name_textbox = gr.Textbox(label="Model name")
# You can use the revision parameter to point to the specific commit hash when downloading.
revision_name_textbox = gr.Textbox(label="Revision commit", placeholder="main")
private = gr.Checkbox(False, label="Private", visible=not IS_PUBLIC)
model_type = gr.Dropdown(
choices=[t.to_str(" : ") for t in ModelType if t != ModelType.Unknown],
label="Model type",
multiselect=False,
value=None,
interactive=True,
)
with gr.Column():
precision = gr.Dropdown(
choices=[i.value.name for i in Precision if i != Precision.Unknown],
label="Precision",
multiselect=False,
value="float32",
interactive=True,
)
weight_type = gr.Dropdown(
choices=[i.value.name for i in WeightType],
label="Weights type",
multiselect=False,
value="Original",
interactive=True,
)
requested_tasks = gr.CheckboxGroup(
choices=[ (i.value.col_name, i.value) for i in Tasks],
label="Select tasks",
elem_id="task-select",
interactive=True,
)
base_model_name_textbox = gr.Textbox(label="Base model (for delta or adapter weights)")
submit_button = gr.Button("Submit Eval")
submission_result = gr.Markdown()
# we need to add task specification argument here as well.
submit_button.click(
add_new_eval,
[
model_name_textbox,
requested_tasks, # is this a list of str or class Task? i think it's Task.
base_model_name_textbox,
revision_name_textbox,
precision,
private,
weight_type,
model_type,
],
submission_result)
# demo.launch()
####
scheduler = BackgroundScheduler()
scheduler.add_job(restart_space, "interval", seconds=6 * 60 * 60)
scheduler.start()
# demo.queue(default_concurrency_limit=40).launch()
# demo.launch(show_api=False, enable_queue=False)
demo.launch() # TypeError: Blocks.launch() got an unexpected keyword argument 'enable_queue'