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A10G
import os | |
import os.path as osp | |
from collections import OrderedDict | |
from functools import reduce | |
import annotator.uniformer.mmcv as mmcv | |
import numpy as np | |
from annotator.uniformer.mmcv.utils import print_log | |
from prettytable import PrettyTable | |
from torch.utils.data import Dataset | |
from annotator.uniformer.mmseg.core import eval_metrics | |
from annotator.uniformer.mmseg.utils import get_root_logger | |
from .builder import DATASETS | |
from .pipelines import Compose | |
class CustomDataset(Dataset): | |
"""Custom dataset for semantic segmentation. An example of file structure | |
is as followed. | |
.. code-block:: none | |
├── data | |
│ ├── my_dataset | |
│ │ ├── img_dir | |
│ │ │ ├── train | |
│ │ │ │ ├── xxx{img_suffix} | |
│ │ │ │ ├── yyy{img_suffix} | |
│ │ │ │ ├── zzz{img_suffix} | |
│ │ │ ├── val | |
│ │ ├── ann_dir | |
│ │ │ ├── train | |
│ │ │ │ ├── xxx{seg_map_suffix} | |
│ │ │ │ ├── yyy{seg_map_suffix} | |
│ │ │ │ ├── zzz{seg_map_suffix} | |
│ │ │ ├── val | |
The img/gt_semantic_seg pair of CustomDataset should be of the same | |
except suffix. A valid img/gt_semantic_seg filename pair should be like | |
``xxx{img_suffix}`` and ``xxx{seg_map_suffix}`` (extension is also included | |
in the suffix). If split is given, then ``xxx`` is specified in txt file. | |
Otherwise, all files in ``img_dir/``and ``ann_dir`` will be loaded. | |
Please refer to ``docs/tutorials/new_dataset.md`` for more details. | |
Args: | |
pipeline (list[dict]): Processing pipeline | |
img_dir (str): Path to image directory | |
img_suffix (str): Suffix of images. Default: '.jpg' | |
ann_dir (str, optional): Path to annotation directory. Default: None | |
seg_map_suffix (str): Suffix of segmentation maps. Default: '.png' | |
split (str, optional): Split txt file. If split is specified, only | |
file with suffix in the splits will be loaded. Otherwise, all | |
images in img_dir/ann_dir will be loaded. Default: None | |
data_root (str, optional): Data root for img_dir/ann_dir. Default: | |
None. | |
test_mode (bool): If test_mode=True, gt wouldn't be loaded. | |
ignore_index (int): The label index to be ignored. Default: 255 | |
reduce_zero_label (bool): Whether to mark label zero as ignored. | |
Default: False | |
classes (str | Sequence[str], optional): Specify classes to load. | |
If is None, ``cls.CLASSES`` will be used. Default: None. | |
palette (Sequence[Sequence[int]]] | np.ndarray | None): | |
The palette of segmentation map. If None is given, and | |
self.PALETTE is None, random palette will be generated. | |
Default: None | |
""" | |
CLASSES = None | |
PALETTE = None | |
def __init__(self, | |
pipeline, | |
img_dir, | |
img_suffix='.jpg', | |
ann_dir=None, | |
seg_map_suffix='.png', | |
split=None, | |
data_root=None, | |
test_mode=False, | |
ignore_index=255, | |
reduce_zero_label=False, | |
classes=None, | |
palette=None): | |
self.pipeline = Compose(pipeline) | |
self.img_dir = img_dir | |
self.img_suffix = img_suffix | |
self.ann_dir = ann_dir | |
self.seg_map_suffix = seg_map_suffix | |
self.split = split | |
self.data_root = data_root | |
self.test_mode = test_mode | |
self.ignore_index = ignore_index | |
self.reduce_zero_label = reduce_zero_label | |
self.label_map = None | |
self.CLASSES, self.PALETTE = self.get_classes_and_palette( | |
classes, palette) | |
# join paths if data_root is specified | |
if self.data_root is not None: | |
if not osp.isabs(self.img_dir): | |
self.img_dir = osp.join(self.data_root, self.img_dir) | |
if not (self.ann_dir is None or osp.isabs(self.ann_dir)): | |
self.ann_dir = osp.join(self.data_root, self.ann_dir) | |
if not (self.split is None or osp.isabs(self.split)): | |
self.split = osp.join(self.data_root, self.split) | |
# load annotations | |
self.img_infos = self.load_annotations(self.img_dir, self.img_suffix, | |
self.ann_dir, | |
self.seg_map_suffix, self.split) | |
def __len__(self): | |
"""Total number of samples of data.""" | |
return len(self.img_infos) | |
def load_annotations(self, img_dir, img_suffix, ann_dir, seg_map_suffix, | |
split): | |
"""Load annotation from directory. | |
Args: | |
img_dir (str): Path to image directory | |
img_suffix (str): Suffix of images. | |
ann_dir (str|None): Path to annotation directory. | |
seg_map_suffix (str|None): Suffix of segmentation maps. | |
split (str|None): Split txt file. If split is specified, only file | |
with suffix in the splits will be loaded. Otherwise, all images | |
in img_dir/ann_dir will be loaded. Default: None | |
Returns: | |
list[dict]: All image info of dataset. | |
""" | |
img_infos = [] | |
if split is not None: | |
with open(split) as f: | |
for line in f: | |
img_name = line.strip() | |
img_info = dict(filename=img_name + img_suffix) | |
if ann_dir is not None: | |
seg_map = img_name + seg_map_suffix | |
img_info['ann'] = dict(seg_map=seg_map) | |
img_infos.append(img_info) | |
else: | |
for img in mmcv.scandir(img_dir, img_suffix, recursive=True): | |
img_info = dict(filename=img) | |
if ann_dir is not None: | |
seg_map = img.replace(img_suffix, seg_map_suffix) | |
img_info['ann'] = dict(seg_map=seg_map) | |
img_infos.append(img_info) | |
print_log(f'Loaded {len(img_infos)} images', logger=get_root_logger()) | |
return img_infos | |
def get_ann_info(self, idx): | |
"""Get annotation by index. | |
Args: | |
idx (int): Index of data. | |
Returns: | |
dict: Annotation info of specified index. | |
""" | |
return self.img_infos[idx]['ann'] | |
def pre_pipeline(self, results): | |
"""Prepare results dict for pipeline.""" | |
results['seg_fields'] = [] | |
results['img_prefix'] = self.img_dir | |
results['seg_prefix'] = self.ann_dir | |
if self.custom_classes: | |
results['label_map'] = self.label_map | |
def __getitem__(self, idx): | |
"""Get training/test data after pipeline. | |
Args: | |
idx (int): Index of data. | |
Returns: | |
dict: Training/test data (with annotation if `test_mode` is set | |
False). | |
""" | |
if self.test_mode: | |
return self.prepare_test_img(idx) | |
else: | |
return self.prepare_train_img(idx) | |
def prepare_train_img(self, idx): | |
"""Get training data and annotations after pipeline. | |
Args: | |
idx (int): Index of data. | |
Returns: | |
dict: Training data and annotation after pipeline with new keys | |
introduced by pipeline. | |
""" | |
img_info = self.img_infos[idx] | |
ann_info = self.get_ann_info(idx) | |
results = dict(img_info=img_info, ann_info=ann_info) | |
self.pre_pipeline(results) | |
return self.pipeline(results) | |
def prepare_test_img(self, idx): | |
"""Get testing data after pipeline. | |
Args: | |
idx (int): Index of data. | |
Returns: | |
dict: Testing data after pipeline with new keys introduced by | |
pipeline. | |
""" | |
img_info = self.img_infos[idx] | |
results = dict(img_info=img_info) | |
self.pre_pipeline(results) | |
return self.pipeline(results) | |
def format_results(self, results, **kwargs): | |
"""Place holder to format result to dataset specific output.""" | |
def get_gt_seg_maps(self, efficient_test=False): | |
"""Get ground truth segmentation maps for evaluation.""" | |
gt_seg_maps = [] | |
for img_info in self.img_infos: | |
seg_map = osp.join(self.ann_dir, img_info['ann']['seg_map']) | |
if efficient_test: | |
gt_seg_map = seg_map | |
else: | |
gt_seg_map = mmcv.imread( | |
seg_map, flag='unchanged', backend='pillow') | |
gt_seg_maps.append(gt_seg_map) | |
return gt_seg_maps | |
def get_classes_and_palette(self, classes=None, palette=None): | |
"""Get class names of current dataset. | |
Args: | |
classes (Sequence[str] | str | None): If classes is None, use | |
default CLASSES defined by builtin dataset. If classes is a | |
string, take it as a file name. The file contains the name of | |
classes where each line contains one class name. If classes is | |
a tuple or list, override the CLASSES defined by the dataset. | |
palette (Sequence[Sequence[int]]] | np.ndarray | None): | |
The palette of segmentation map. If None is given, random | |
palette will be generated. Default: None | |
""" | |
if classes is None: | |
self.custom_classes = False | |
return self.CLASSES, self.PALETTE | |
self.custom_classes = True | |
if isinstance(classes, str): | |
# take it as a file path | |
class_names = mmcv.list_from_file(classes) | |
elif isinstance(classes, (tuple, list)): | |
class_names = classes | |
else: | |
raise ValueError(f'Unsupported type {type(classes)} of classes.') | |
if self.CLASSES: | |
if not set(classes).issubset(self.CLASSES): | |
raise ValueError('classes is not a subset of CLASSES.') | |
# dictionary, its keys are the old label ids and its values | |
# are the new label ids. | |
# used for changing pixel labels in load_annotations. | |
self.label_map = {} | |
for i, c in enumerate(self.CLASSES): | |
if c not in class_names: | |
self.label_map[i] = -1 | |
else: | |
self.label_map[i] = classes.index(c) | |
palette = self.get_palette_for_custom_classes(class_names, palette) | |
return class_names, palette | |
def get_palette_for_custom_classes(self, class_names, palette=None): | |
if self.label_map is not None: | |
# return subset of palette | |
palette = [] | |
for old_id, new_id in sorted( | |
self.label_map.items(), key=lambda x: x[1]): | |
if new_id != -1: | |
palette.append(self.PALETTE[old_id]) | |
palette = type(self.PALETTE)(palette) | |
elif palette is None: | |
if self.PALETTE is None: | |
palette = np.random.randint(0, 255, size=(len(class_names), 3)) | |
else: | |
palette = self.PALETTE | |
return palette | |
def evaluate(self, | |
results, | |
metric='mIoU', | |
logger=None, | |
efficient_test=False, | |
**kwargs): | |
"""Evaluate the dataset. | |
Args: | |
results (list): Testing results of the dataset. | |
metric (str | list[str]): Metrics to be evaluated. 'mIoU', | |
'mDice' and 'mFscore' are supported. | |
logger (logging.Logger | None | str): Logger used for printing | |
related information during evaluation. Default: None. | |
Returns: | |
dict[str, float]: Default metrics. | |
""" | |
if isinstance(metric, str): | |
metric = [metric] | |
allowed_metrics = ['mIoU', 'mDice', 'mFscore'] | |
if not set(metric).issubset(set(allowed_metrics)): | |
raise KeyError('metric {} is not supported'.format(metric)) | |
eval_results = {} | |
gt_seg_maps = self.get_gt_seg_maps(efficient_test) | |
if self.CLASSES is None: | |
num_classes = len( | |
reduce(np.union1d, [np.unique(_) for _ in gt_seg_maps])) | |
else: | |
num_classes = len(self.CLASSES) | |
ret_metrics = eval_metrics( | |
results, | |
gt_seg_maps, | |
num_classes, | |
self.ignore_index, | |
metric, | |
label_map=self.label_map, | |
reduce_zero_label=self.reduce_zero_label) | |
if self.CLASSES is None: | |
class_names = tuple(range(num_classes)) | |
else: | |
class_names = self.CLASSES | |
# summary table | |
ret_metrics_summary = OrderedDict({ | |
ret_metric: np.round(np.nanmean(ret_metric_value) * 100, 2) | |
for ret_metric, ret_metric_value in ret_metrics.items() | |
}) | |
# each class table | |
ret_metrics.pop('aAcc', None) | |
ret_metrics_class = OrderedDict({ | |
ret_metric: np.round(ret_metric_value * 100, 2) | |
for ret_metric, ret_metric_value in ret_metrics.items() | |
}) | |
ret_metrics_class.update({'Class': class_names}) | |
ret_metrics_class.move_to_end('Class', last=False) | |
# for logger | |
class_table_data = PrettyTable() | |
for key, val in ret_metrics_class.items(): | |
class_table_data.add_column(key, val) | |
summary_table_data = PrettyTable() | |
for key, val in ret_metrics_summary.items(): | |
if key == 'aAcc': | |
summary_table_data.add_column(key, [val]) | |
else: | |
summary_table_data.add_column('m' + key, [val]) | |
print_log('per class results:', logger) | |
print_log('\n' + class_table_data.get_string(), logger=logger) | |
print_log('Summary:', logger) | |
print_log('\n' + summary_table_data.get_string(), logger=logger) | |
# each metric dict | |
for key, value in ret_metrics_summary.items(): | |
if key == 'aAcc': | |
eval_results[key] = value / 100.0 | |
else: | |
eval_results['m' + key] = value / 100.0 | |
ret_metrics_class.pop('Class', None) | |
for key, value in ret_metrics_class.items(): | |
eval_results.update({ | |
key + '.' + str(name): value[idx] / 100.0 | |
for idx, name in enumerate(class_names) | |
}) | |
if mmcv.is_list_of(results, str): | |
for file_name in results: | |
os.remove(file_name) | |
return eval_results | |