feat: Add all files

Makefile

@@ -1,13 +0,0 @@
-.PHONY: style format
-
-
-style:
-	python -m black --line-length 119 .
-	python -m isort .
-	ruff check --fix .
-
-
-quality:
-	python -m black --check --line-length 119 .
-	python -m isort --check-only .
-	ruff check .

README.md

@@ -1,44 +1,14 @@
 ---
 title: Toy Benchmark
-emoji: 🥇
-colorFrom: green
+emoji: 🏆
+colorFrom: blue
 colorTo: indigo
 sdk: gradio
+sdk_version: 4.4.1
 app_file: app.py
-pinned: true
-license: apache-2.0
+pinned: false
+models: ["InstaDeepAI/nucleotide-transformer-500m-human-ref", "InstaDeepAI/nucleotide-transformer-500m-1000g", "InstaDeepAI/nucleotide-transformer-2.5b-1000g", "InstaDeepAI/nucleotide-transformer-2.5b-multi-species", "InstaDeepAI/nucleotide-transformer-v2-50m-multi-species", "InstaDeepAI/nucleotide-transformer-v2-100m-multi-species", "InstaDeepAI/nucleotide-transformer-v2-250m-multi-species", "InstaDeepAI/nucleotide-transformer-v2-500m-multi-species"]
+datasets: ["InstaDeepAI/nucleotide_transformer_downstream_tasks"]
 ---
 
-# Start the configuration
-
-Most of the variables to change for a default leaderboard are in `src/env.py` (replace the path for your leaderboard) and `src/about.py` (for tasks).
-
-Results files should have the following format and be stored as json files:
-```json
-{
-    "config": {
-        "model_dtype": "torch.float16", # or torch.bfloat16 or 8bit or 4bit
-        "model_name": "path of the model on the hub: org/model",
-        "model_sha": "revision on the hub",
-    },
-    "results": {
-        "task_name": {
-            "metric_name": score,
-        },
-        "task_name2": {
-            "metric_name": score,
-        }
-    }
-}
-```
-
-Request files are created automatically by this tool.
-
-If you encounter problem on the space, don't hesitate to restart it to remove the create eval-queue, eval-queue-bk, eval-results and eval-results-bk created folder.
-
-# Code logic for more complex edits
-
-You'll find 
-- the main table' columns names and properties in `src/display/utils.py`
-- the logic to read all results and request files, then convert them in dataframe lines, in `src/leaderboard/read_evals.py`, and `src/populate.py`
-- the logic to allow or filter submissions in `src/submission/submit.py` and `src/submission/check_validity.py`
+Check out the configuration reference at https://huggingface.co/docs/hub/spaces-config-reference

app.py

@@ -1,204 +1,267 @@
+from typing import List
+
 import gradio as gr
-from gradio_leaderboard import Leaderboard, ColumnFilter, SelectColumns
+import numpy as np
 import pandas as pd
-from apscheduler.schedulers.background import BackgroundScheduler
-from huggingface_hub import snapshot_download
-
-from src.about import (
-    CITATION_BUTTON_LABEL,
-    CITATION_BUTTON_TEXT,
-    EVALUATION_QUEUE_TEXT,
-    INTRODUCTION_TEXT,
-    LLM_BENCHMARKS_TEXT,
-    TITLE,
-)
-from src.display.css_html_js import custom_css
-from src.display.utils import (
-    BENCHMARK_COLS,
-    COLS,
-    EVAL_COLS,
-    EVAL_TYPES,
-    AutoEvalColumn,
-    ModelType,
-    fields,
-    WeightType,
-    Precision
-)
-from src.envs import API, EVAL_REQUESTS_PATH, EVAL_RESULTS_PATH, QUEUE_REPO, REPO_ID, RESULTS_REPO, TOKEN
-from src.populate import get_evaluation_queue_df, get_leaderboard_df
-from src.submission.submit import add_new_eval
-
-
-def restart_space():
-    API.restart_space(repo_id=REPO_ID)
-
-### Space initialisation
-try:
-    print(EVAL_REQUESTS_PATH)
-    snapshot_download(
-        repo_id=QUEUE_REPO, local_dir=EVAL_REQUESTS_PATH, repo_type="dataset", tqdm_class=None, etag_timeout=30, token=TOKEN
-    )
-except Exception:
-    restart_space()
-try:
-    print(EVAL_RESULTS_PATH)
-    snapshot_download(
-        repo_id=RESULTS_REPO, local_dir=EVAL_RESULTS_PATH, repo_type="dataset", tqdm_class=None, etag_timeout=30, token=TOKEN
-    )
-except Exception:
-    restart_space()
-
-
-LEADERBOARD_DF = get_leaderboard_df(EVAL_RESULTS_PATH, EVAL_REQUESTS_PATH, COLS, BENCHMARK_COLS)
-
-(
-    finished_eval_queue_df,
-    running_eval_queue_df,
-    pending_eval_queue_df,
-) = get_evaluation_queue_df(EVAL_REQUESTS_PATH, EVAL_COLS)
-
-def init_leaderboard(dataframe):
-    if dataframe is None or dataframe.empty:
-        raise ValueError("Leaderboard DataFrame is empty or None.")
-    return Leaderboard(
-        value=dataframe,
-        datatype=[c.type for c in fields(AutoEvalColumn)],
-        select_columns=SelectColumns(
-            default_selection=[c.name for c in fields(AutoEvalColumn) if c.displayed_by_default],
-            cant_deselect=[c.name for c in fields(AutoEvalColumn) if c.never_hidden],
-            label="Select Columns to Display:",
-        ),
-        search_columns=[AutoEvalColumn.model.name, AutoEvalColumn.license.name],
-        hide_columns=[c.name for c in fields(AutoEvalColumn) if c.hidden],
-        filter_columns=[
-            ColumnFilter(AutoEvalColumn.model_type.name, type="checkboxgroup", label="Model types"),
-            ColumnFilter(AutoEvalColumn.precision.name, type="checkboxgroup", label="Precision"),
-            ColumnFilter(
-                AutoEvalColumn.params.name,
-                type="slider",
-                min=0.01,
-                max=150,
-                label="Select the number of parameters (B)",
-            ),
-            ColumnFilter(
-                AutoEvalColumn.still_on_hub.name, type="boolean", label="Deleted/incomplete", default=True
-            ),
-        ],
-        bool_checkboxgroup_label="Hide models",
+
+_ORIGINAL_DF = pd.read_csv("./data/benchmark.csv")
+_METRICS = ["MCC", "F1", "ACC"]
+_AGGREGATION_METHODS = ["mean", "max", "min", "median"]
+_TASKS = {
+    "histone_marks": [
+        "H4",
+        "H3",
+        "H3K14ac",
+        "H3K4me1",
+        "H3K4me3",
+        "H3K4me2",
+        "H3K36me3",
+        "H4ac",
+        "H3K79me3",
+        "H3K9ac",
+    ],
+    "regulatory_elements": [
+        "promoter_no_tata",
+        "enhancers",
+        "enhancers_types",
+        "promoter_all",
+        "promoter_tata",
+    ],
+    "RNA_production": [
+        "splice_sites_donors",
+        "splice_sites_all",
+        "splice_sites_acceptors",
+    ],
+}
+
+_BIBTEX = """@article{DallaTorre2023TheNT,
+  title={The Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics},
+  author={Hugo Dalla-Torre and Liam Gonzalez and Javier Mendoza Revilla and Nicolas Lopez Carranza and Adam Henryk Grzywaczewski and Francesco Oteri and Christian Dallago and Evan Trop and Hassan Sirelkhatim and Guillaume Richard and Marcin J. Skwark and Karim Beguir and Marie Lopez and Thomas Pierrot},
+  journal={bioRxiv},
+  year={2023},
+  url={https://api.semanticscholar.org/CorpusID:255943445}
+}
+"""  # noqa
+_LAST_UPDATED = "Sept 15, 2023"
+
+banner_url = "./assets/logo.png"
+_BANNER = f'<div style="display: flex; justify-content: space-around;"><img src="{banner_url}" alt="Banner" style="width: 40vw; min-width: 300px; max-width: 600px;"> </div>'  # noqa
+
+_INTRODUCTION_TEXT = """The 🤗 Nucleotide Transformer Leaderboard aims to track, rank and evaluate DNA foundational models on a set of curated downstream tasks introduced in the huggingface dataset [nucleotide_transformer_downstream_tasks](https://huggingface.co/datasets/InstaDeepAI/nucleotide_transformer_downstream_tasks), with a standardized evaluation protocol presented in the "ℹ️ Methods" tab.\n\n
+
+This leaderboard has been designed to provide, to the best of our ability, fair and robust comparisons between models. If you have any question or concern regarding our methodology or if you would like another model to appear in this leaderboard, please reach out to m.lopez@instadeep.com and t.pierrot@instadeep.com. While we may not be able to take into consideration all requests, the team will always do its best to ensure that benchmark stays as fair, relevant and up-to-date as possible.\n\n
+ """  # noqa
+
+_METHODS_TEXT = """
+This leaderboard uses the downstream tasks benchmark and evaluation methdology described in the Nucleotide Transformer paper. We fine-tune each model on each task using a ten-fold validation strategy. For each model and each task, we report the aggregation over the ten-folds for several metrics - the Matthew Correlation Coefficient (MCC), the macro f1-score (F1) and the accuracy (ACC). The Nucleotide Transformer, DNABert and Enformer models have been fine-tuned using the same parameter efficient fine-tuning technique (IA3) with the same set of hyper-parameters. Due to the different nature of their architecture, the HyenaDNA models have been fully-finetuned using the original code provided by the authors.
+\n\n
+
+Please keep in mind that the Enformer has been originally trained in a supervised fashion to solve gene expression tasks. For the sake of benchmarking, we re-used the provided model torso as a pre-trained model for our benchmark, which is not the intended and recommended use of the original paper. Though we think this comparison is interesting to highlight the differences between self-supervised and supervised learning for pre-training and observe that the Enformer is a very competitive baseline even for tasks that differ from gene expression.
+\n\n
+
+For the sake of clarity the tasks being shown by default in this leaderboard are the human related tasks while the original Nucleotide Transformer paper shows performance over both yeast and human related tasks. To obtain the same results as the one shown in the paper, please check all the tasks boxes above.
+\n\n
+"""  # noqa
+
+
+def retrieve_array_from_text(text):
+    return np.fromstring(text.replace("[", "").replace("]", ""), dtype=float, sep=",")
+
+
+def format_number(x):
+    return float(f"{x:.3}")
+
+
+def get_dataset(
+    histone_tasks: List[str],
+    regulatory_tasks: List[str],
+    rna_tasks: List[str],
+    target_metric: str = "MCC",
+    aggregation_method: str = "mean",
+):
+    tasks = histone_tasks + regulatory_tasks + rna_tasks
+
+    aggr_fn = getattr(np, aggregation_method)
+    scores = _ORIGINAL_DF[target_metric].apply(retrieve_array_from_text).apply(aggr_fn)
+    scores = scores.apply(format_number)
+    df = _ORIGINAL_DF.drop(columns=_METRICS)
+    df["Score"] = scores
+    df = df.pivot(index="Model", columns="Dataset", values="Score")
+    df = df[tasks]
+    df["All Tasks"] = df.agg("mean", axis="columns").apply(format_number)
+    columns = list(df.columns.values)
+    columns.sort()
+    df = df[columns]
+    df.reset_index(inplace=True)
+    df = df.rename(columns={"index": "Model"})
+    df = df.sort_values(by=["All Tasks"], ascending=False)
+
+    leaderboard_table = gr.components.Dataframe(
+        value=df,
         interactive=False,
+        visible=True,
     )
+    return leaderboard_table
+
+
+def get_bar_plot(
+    histone_tasks: List[str],
+    regulatory_tasks: List[str],
+    rna_tasks: List[str],
+    target_metric: str = "MCC",
+    aggregation_method: str = "mean",
+):
+    tasks = histone_tasks + regulatory_tasks + rna_tasks
 
+    aggr_fn = getattr(np, aggregation_method)
+    scores = _ORIGINAL_DF[target_metric].apply(retrieve_array_from_text).apply(aggr_fn)
+    scores = scores.apply(format_number)
+    df = _ORIGINAL_DF.drop(columns=_METRICS)
+    df["Score"] = scores / len(tasks)
+    df = df.query(f"Dataset == {tasks}")
+
+    bar_plot = gr.BarPlot(
+        df,
+        x="Model",
+        y="Score",
+        color="Dataset",
+        width=500,
+        x_label_angle=-45,
+        x_title="Model",
+        y_title="Score",
+        color_legend_title="Downstream Task",
+    )
+    return bar_plot
 
-demo = gr.Blocks(css=custom_css)
-with demo:
-    gr.HTML(TITLE)
-    gr.Markdown(INTRODUCTION_TEXT, elem_classes="markdown-text")
+
+with gr.Blocks() as demo:
+    with gr.Row():
+        gr.Image(banner_url, height=160, scale=1)
+        gr.Markdown(_INTRODUCTION_TEXT, elem_classes="markdown-text")
+        # gr.Textbox(_INTRODUCTION_TEXT, scale=5)
+
+    with gr.Row():
+        metric_choice = gr.Dropdown(
+            choices=_METRICS,
+            value="MCC",
+            label="Metric displayed.",
+        )
+        aggr_choice = gr.Dropdown(
+            choices=_AGGREGATION_METHODS,
+            value="mean",
+            label="Aggregation used over 10-folds.",
+        )
+
+    with gr.Row():
+        regulatory_tasks = gr.CheckboxGroup(
+            choices=_TASKS["regulatory_elements"],
+            value=_TASKS["regulatory_elements"],
+            label="Regulatory Elements Downstream Tasks.",
+            info="Human data.",
+            scale=3,
+        )
+        rna_tasks = gr.CheckboxGroup(
+            choices=_TASKS["RNA_production"],
+            value=_TASKS["RNA_production"],
+            label="RNA Production Downstream Tasks.",
+            info="Human data.",
+            scale=3,
+        )
+        histone_tasks = gr.CheckboxGroup(
+            choices=_TASKS["histone_marks"],
+            label="Histone Modification Downstream Tasks.",
+            info="Yeast data.",
+            scale=4,
+        )
 
     with gr.Tabs(elem_classes="tab-buttons") as tabs:
-        with gr.TabItem("🏅 LLM Benchmark", elem_id="llm-benchmark-tab-table", id=0):
-            leaderboard = init_leaderboard(LEADERBOARD_DF)
-
-        with gr.TabItem("📝 About", elem_id="llm-benchmark-tab-table", id=2):
-            gr.Markdown(LLM_BENCHMARKS_TEXT, elem_classes="markdown-text")
-
-        with gr.TabItem("🚀 Submit here! ", elem_id="llm-benchmark-tab-table", id=3):
-            with gr.Column():
-                with gr.Row():
-                    gr.Markdown(EVALUATION_QUEUE_TEXT, elem_classes="markdown-text")
-
-                with gr.Column():
-                    with gr.Accordion(
-                        f"✅ Finished Evaluations ({len(finished_eval_queue_df)})",
-                        open=False,
-                    ):
-                        with gr.Row():
-                            finished_eval_table = gr.components.Dataframe(
-                                value=finished_eval_queue_df,
-                                headers=EVAL_COLS,
-                                datatype=EVAL_TYPES,
-                                row_count=5,
-                            )
-                    with gr.Accordion(
-                        f"🔄 Running Evaluation Queue ({len(running_eval_queue_df)})",
-                        open=False,
-                    ):
-                        with gr.Row():
-                            running_eval_table = gr.components.Dataframe(
-                                value=running_eval_queue_df,
-                                headers=EVAL_COLS,
-                                datatype=EVAL_TYPES,
-                                row_count=5,
-                            )
-
-                    with gr.Accordion(
-                        f"⏳ Pending Evaluation Queue ({len(pending_eval_queue_df)})",
-                        open=False,
-                    ):
-                        with gr.Row():
-                            pending_eval_table = gr.components.Dataframe(
-                                value=pending_eval_queue_df,
-                                headers=EVAL_COLS,
-                                datatype=EVAL_TYPES,
-                                row_count=5,
-                            )
-            with gr.Row():
-                gr.Markdown("# ✉️✨ Submit your model here!", elem_classes="markdown-text")
-
-            with gr.Row():
-                with gr.Column():
-                    model_name_textbox = gr.Textbox(label="Model name")
-                    revision_name_textbox = gr.Textbox(label="Revision commit", placeholder="main")
-                    model_type = gr.Dropdown(
-                        choices=[t.to_str(" : ") for t in ModelType if t != ModelType.Unknown],
-                        label="Model type",
-                        multiselect=False,
-                        value=None,
-                        interactive=True,
-                    )
-
-                with gr.Column():
-                    precision = gr.Dropdown(
-                        choices=[i.value.name for i in Precision if i != Precision.Unknown],
-                        label="Precision",
-                        multiselect=False,
-                        value="float16",
-                        interactive=True,
-                    )
-                    weight_type = gr.Dropdown(
-                        choices=[i.value.name for i in WeightType],
-                        label="Weights type",
-                        multiselect=False,
-                        value="Original",
-                        interactive=True,
-                    )
-                    base_model_name_textbox = gr.Textbox(label="Base model (for delta or adapter weights)")
-
-            submit_button = gr.Button("Submit Eval")
-            submission_result = gr.Markdown()
-            submit_button.click(
-                add_new_eval,
-                [
-                    model_name_textbox,
-                    base_model_name_textbox,
-                    revision_name_textbox,
-                    precision,
-                    weight_type,
-                    model_type,
-                ],
-                submission_result,
+        with gr.TabItem("🏅 Leaderboard", elem_id="od-benchmark-tab-table", id=0):
+            dataframe = gr.components.Dataframe(
+                elem_id="leaderboard-table",
+            )
+
+        with gr.TabItem("📈 Graph", elem_id="od-benchmark-tab-table", id=2):
+            bar_plot = gr.BarPlot(
+                elem_id="leaderboard-bar-plot",
+                x="Models",
+                y="Score",
             )
 
+        with gr.TabItem("ℹ️ Methods", elem_id="od-benchmark-tab-table", id=1):
+            gr.Markdown(_METHODS_TEXT, elem_classes="markdown-text")
+
+    gr.Markdown(f"Last updated on **{_LAST_UPDATED}**", elem_classes="markdown-text")
+
     with gr.Row():
         with gr.Accordion("📙 Citation", open=False):
-            citation_button = gr.Textbox(
-                value=CITATION_BUTTON_TEXT,
-                label=CITATION_BUTTON_LABEL,
-                lines=20,
+            gr.Textbox(
+                value=_BIBTEX,
+                lines=7,
+                label="Copy the BibTeX snippet to cite this source",
                 elem_id="citation-button",
-                show_copy_button=True,
+                show_copy_button=True
             )
 
-scheduler = BackgroundScheduler()
-scheduler.add_job(restart_space, "interval", seconds=1800)
-scheduler.start()
-demo.queue(default_concurrency_limit=40).launch()
+    histone_tasks.change(
+        get_dataset,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=dataframe,
+    )
+    regulatory_tasks.change(
+        get_dataset,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=dataframe,
+    )
+    rna_tasks.change(
+        get_dataset,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=dataframe,
+    )
+    metric_choice.change(
+        get_dataset,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=dataframe,
+    )
+    aggr_choice.change(
+        get_dataset,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=dataframe,
+    )
+    demo.load(
+        fn=get_dataset,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=dataframe,
+    )
+
+    histone_tasks.change(
+        get_bar_plot,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=bar_plot,
+    )
+    regulatory_tasks.change(
+        get_bar_plot,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=bar_plot,
+    )
+    rna_tasks.change(
+        get_bar_plot,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=bar_plot,
+    )
+    metric_choice.change(
+        get_bar_plot,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=bar_plot,
+    )
+    aggr_choice.change(
+        get_bar_plot,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=bar_plot,
+    )
+    demo.load(
+        fn=get_bar_plot,
+        inputs=[histone_tasks, regulatory_tasks, rna_tasks, metric_choice, aggr_choice],
+        outputs=bar_plot,
+    )
+
+demo.launch()

pyproject.toml

@@ -1,13 +0,0 @@
-[tool.ruff]
-# Enable pycodestyle (`E`) and Pyflakes (`F`) codes by default.
-select = ["E", "F"]
-ignore = ["E501"] # line too long (black is taking care of this)
-line-length = 119
-fixable = ["A", "B", "C", "D", "E", "F", "G", "I", "N", "Q", "S", "T", "W", "ANN", "ARG", "BLE", "COM", "DJ", "DTZ", "EM", "ERA", "EXE", "FBT", "ICN", "INP", "ISC", "NPY", "PD", "PGH", "PIE", "PL", "PT", "PTH", "PYI", "RET", "RSE", "RUF", "SIM", "SLF", "TCH", "TID", "TRY", "UP", "YTT"]
-
-[tool.isort]
-profile = "black"
-line_length = 119
-
-[tool.black]
-line-length = 119

requirements.txt

@@ -1,16 +1,65 @@
-APScheduler
-black
-datasets
-gradio
-gradio[oauth]
-gradio_leaderboard==0.0.9
-gradio_client
-huggingface-hub>=0.18.0
-matplotlib
-numpy
-pandas
-python-dateutil
-tqdm
-transformers
-tokenizers>=0.15.0
-sentencepiece
+aiofiles==23.2.1
+altair==5.1.2
+annotated-types==0.6.0
+anyio==3.7.1
+attrs==23.1.0
+certifi==2023.11.17
+charset-normalizer==3.3.2
+click==8.1.7
+colorama==0.4.6
+contourpy==1.2.0
+cycler==0.12.1
+exceptiongroup==1.1.3
+fastapi==0.104.1
+ffmpy==0.3.1
+filelock==3.13.1
+fonttools==4.45.0
+fsspec==2023.10.0
+gradio==4.4.1
+gradio_client==0.7.0
+h11==0.14.0
+httpcore==1.0.2
+httpx==0.25.1
+huggingface-hub==0.19.4
+idna==3.4
+importlib-resources==6.1.1
+Jinja2==3.1.2
+jsonschema==4.20.0
+jsonschema-specifications==2023.11.1
+kiwisolver==1.4.5
+markdown-it-py==3.0.0
+MarkupSafe==2.1.3
+matplotlib==3.8.2
+mdurl==0.1.2
+numpy==1.26.2
+orjson==3.9.10
+packaging==23.2
+pandas==2.1.3
+Pillow==10.1.0
+pydantic==2.5.1
+pydantic_core==2.14.3
+pydub==0.25.1
+Pygments==2.17.1
+pyparsing==3.1.1
+python-dateutil==2.8.2
+python-multipart==0.0.6
+pytz==2023.3.post1
+PyYAML==6.0.1
+referencing==0.31.0
+requests==2.31.0
+rich==13.7.0
+rpds-py==0.13.1
+semantic-version==2.10.0
+shellingham==1.5.4
+six==1.16.0
+sniffio==1.3.0
+starlette==0.27.0
+tomlkit==0.12.0
+toolz==0.12.0
+tqdm==4.66.1
+typer==0.9.0
+typing_extensions==4.8.0
+tzdata==2023.3
+urllib3==2.1.0
+uvicorn==0.24.0.post1
+websockets==11.0.3

src/about.py

@@ -1,72 +0,0 @@
-from dataclasses import dataclass
-from enum import Enum
-
-@dataclass
-class Task:
-    benchmark: str
-    metric: str
-    col_name: str
-
-
-# Select your tasks here
-# ---------------------------------------------------
-class Tasks(Enum):
-    # task_key in the json file, metric_key in the json file, name to display in the leaderboard 
-    task0 = Task("anli_r1", "acc", "ANLI")
-    task1 = Task("logiqa", "acc_norm", "LogiQA")
-
-NUM_FEWSHOT = 0 # Change with your few shot
-# ---------------------------------------------------
-
-
-
-# Your leaderboard name
-TITLE = """<h1 align="center" id="space-title">Demo leaderboard</h1>"""
-
-# What does your leaderboard evaluate?
-INTRODUCTION_TEXT = """
-Intro text
-"""
-
-# Which evaluations are you running? how can people reproduce what you have?
-LLM_BENCHMARKS_TEXT = f"""
-## How it works
-
-## Reproducibility
-To reproduce our results, here is the commands you can run:
-
-"""
-
-EVALUATION_QUEUE_TEXT = """
-## Some good practices before submitting a model
-
-### 1) Make sure you can load your model and tokenizer using AutoClasses:
-```python
-from transformers import AutoConfig, AutoModel, AutoTokenizer
-config = AutoConfig.from_pretrained("your model name", revision=revision)
-model = AutoModel.from_pretrained("your model name", revision=revision)
-tokenizer = AutoTokenizer.from_pretrained("your model name", revision=revision)
-```
-If this step fails, follow the error messages to debug your model before submitting it. It's likely your model has been improperly uploaded.
-
-Note: make sure your model is public!
-Note: if your model needs `use_remote_code=True`, we do not support this option yet but we are working on adding it, stay posted!
-
-### 2) Convert your model weights to [safetensors](https://huggingface.co/docs/safetensors/index)
-It's a new format for storing weights which is safer and faster to load and use. It will also allow us to add the number of parameters of your model to the `Extended Viewer`!
-
-### 3) Make sure your model has an open license!
-This is a leaderboard for Open LLMs, and we'd love for as many people as possible to know they can use your model 🤗
-
-### 4) Fill up your model card
-When we add extra information about models to the leaderboard, it will be automatically taken from the model card
-
-## In case of model failure
-If your model is displayed in the `FAILED` category, its execution stopped.
-Make sure you have followed the above steps first.
-If everything is done, check you can launch the EleutherAIHarness on your model locally, using the above command without modifications (you can add `--limit` to limit the number of examples per task).
-"""
-
-CITATION_BUTTON_LABEL = "Copy the following snippet to cite these results"
-CITATION_BUTTON_TEXT = r"""
-"""

src/display/css_html_js.py

@@ -1,105 +0,0 @@
-custom_css = """
-
-.markdown-text {
-    font-size: 16px !important;
-}
-
-#models-to-add-text {
-    font-size: 18px !important;
-}
-
-#citation-button span {
-    font-size: 16px !important;
-}
-
-#citation-button textarea {
-    font-size: 16px !important;
-}
-
-#citation-button > label > button {
-    margin: 6px;
-    transform: scale(1.3);
-}
-
-#leaderboard-table {
-    margin-top: 15px
-}
-
-#leaderboard-table-lite {
-    margin-top: 15px
-}
-
-#search-bar-table-box > div:first-child {
-    background: none;
-    border: none;
-}
- 
-#search-bar {
-    padding: 0px;
-}
-
-/* Limit the width of the first AutoEvalColumn so that names don't expand too much */
-table td:first-child,
-table th:first-child {
-    max-width: 400px;
-    overflow: auto;
-    white-space: nowrap;
-}
-
-.tab-buttons button {
-    font-size: 20px;
-}
-
-#scale-logo {
-    border-style: none !important;
-    box-shadow: none;
-    display: block;
-    margin-left: auto;
-    margin-right: auto;
-    max-width: 600px;
-}
-
-#scale-logo .download {
-    display: none;
-}
-#filter_type{
-    border: 0;
-    padding-left: 0;
-    padding-top: 0;
-}
-#filter_type label {
-    display: flex;
-}
-#filter_type label > span{
-    margin-top: var(--spacing-lg);
-    margin-right: 0.5em;
-}
-#filter_type label > .wrap{
-    width: 103px;
-}
-#filter_type label > .wrap .wrap-inner{  
-    padding: 2px;
-}
-#filter_type label > .wrap .wrap-inner input{
-    width: 1px
-}
-#filter-columns-type{
-    border:0;
-    padding:0.5;
-}
-#filter-columns-size{
-    border:0;
-    padding:0.5;
-}
-#box-filter > .form{
-    border: 0
-}
-"""
-
-get_window_url_params = """
-    function(url_params) {
-        const params = new URLSearchParams(window.location.search);
-        url_params = Object.fromEntries(params);
-        return url_params;
-    }
-    """

src/display/formatting.py

@@ -1,27 +0,0 @@
-def model_hyperlink(link, model_name):
-    return f'<a target="_blank" href="{link}" style="color: var(--link-text-color); text-decoration: underline;text-decoration-style: dotted;">{model_name}</a>'
-
-
-def make_clickable_model(model_name):
-    link = f"https://huggingface.co/{model_name}"
-    return model_hyperlink(link, model_name)
-
-
-def styled_error(error):
-    return f"<p style='color: red; font-size: 20px; text-align: center;'>{error}</p>"
-
-
-def styled_warning(warn):
-    return f"<p style='color: orange; font-size: 20px; text-align: center;'>{warn}</p>"
-
-
-def styled_message(message):
-    return f"<p style='color: green; font-size: 20px; text-align: center;'>{message}</p>"
-
-
-def has_no_nan_values(df, columns):
-    return df[columns].notna().all(axis=1)
-
-
-def has_nan_values(df, columns):
-    return df[columns].isna().any(axis=1)

src/display/utils.py

@@ -1,110 +0,0 @@
-from dataclasses import dataclass, make_dataclass
-from enum import Enum
-
-import pandas as pd
-
-from src.about import Tasks
-
-def fields(raw_class):
-    return [v for k, v in raw_class.__dict__.items() if k[:2] != "__" and k[-2:] != "__"]
-
-
-# These classes are for user facing column names,
-# to avoid having to change them all around the code
-# when a modif is needed
-@dataclass
-class ColumnContent:
-    name: str
-    type: str
-    displayed_by_default: bool
-    hidden: bool = False
-    never_hidden: bool = False
-
-## Leaderboard columns
-auto_eval_column_dict = []
-# Init
-auto_eval_column_dict.append(["model_type_symbol", ColumnContent, ColumnContent("T", "str", True, never_hidden=True)])
-auto_eval_column_dict.append(["model", ColumnContent, ColumnContent("Model", "markdown", True, never_hidden=True)])
-#Scores
-auto_eval_column_dict.append(["average", ColumnContent, ColumnContent("Average ⬆️", "number", True)])
-for task in Tasks:
-    auto_eval_column_dict.append([task.name, ColumnContent, ColumnContent(task.value.col_name, "number", True)])
-# Model information
-auto_eval_column_dict.append(["model_type", ColumnContent, ColumnContent("Type", "str", False)])
-auto_eval_column_dict.append(["architecture", ColumnContent, ColumnContent("Architecture", "str", False)])
-auto_eval_column_dict.append(["weight_type", ColumnContent, ColumnContent("Weight type", "str", False, True)])
-auto_eval_column_dict.append(["precision", ColumnContent, ColumnContent("Precision", "str", False)])
-auto_eval_column_dict.append(["license", ColumnContent, ColumnContent("Hub License", "str", False)])
-auto_eval_column_dict.append(["params", ColumnContent, ColumnContent("#Params (B)", "number", False)])
-auto_eval_column_dict.append(["likes", ColumnContent, ColumnContent("Hub ❤️", "number", False)])
-auto_eval_column_dict.append(["still_on_hub", ColumnContent, ColumnContent("Available on the hub", "bool", False)])
-auto_eval_column_dict.append(["revision", ColumnContent, ColumnContent("Model sha", "str", False, False)])
-
-# We use make dataclass to dynamically fill the scores from Tasks
-AutoEvalColumn = make_dataclass("AutoEvalColumn", auto_eval_column_dict, frozen=True)
-
-## For the queue columns in the submission tab
-@dataclass(frozen=True)
-class EvalQueueColumn:  # Queue column
-    model = ColumnContent("model", "markdown", True)
-    revision = ColumnContent("revision", "str", True)
-    private = ColumnContent("private", "bool", True)
-    precision = ColumnContent("precision", "str", True)
-    weight_type = ColumnContent("weight_type", "str", "Original")
-    status = ColumnContent("status", "str", True)
-
-## All the model information that we might need
-@dataclass
-class ModelDetails:
-    name: str
-    display_name: str = ""
-    symbol: str = "" # emoji
-
-
-class ModelType(Enum):
-    PT = ModelDetails(name="pretrained", symbol="🟢")
-    FT = ModelDetails(name="fine-tuned", symbol="🔶")
-    IFT = ModelDetails(name="instruction-tuned", symbol="⭕")
-    RL = ModelDetails(name="RL-tuned", symbol="🟦")
-    Unknown = ModelDetails(name="", symbol="?")
-
-    def to_str(self, separator=" "):
-        return f"{self.value.symbol}{separator}{self.value.name}"
-
-    @staticmethod
-    def from_str(type):
-        if "fine-tuned" in type or "🔶" in type:
-            return ModelType.FT
-        if "pretrained" in type or "🟢" in type:
-            return ModelType.PT
-        if "RL-tuned" in type or "🟦" in type:
-            return ModelType.RL
-        if "instruction-tuned" in type or "⭕" in type:
-            return ModelType.IFT
-        return ModelType.Unknown
-
-class WeightType(Enum):
-    Adapter = ModelDetails("Adapter")
-    Original = ModelDetails("Original")
-    Delta = ModelDetails("Delta")
-
-class Precision(Enum):
-    float16 = ModelDetails("float16")
-    bfloat16 = ModelDetails("bfloat16")
-    Unknown = ModelDetails("?")
-
-    def from_str(precision):
-        if precision in ["torch.float16", "float16"]:
-            return Precision.float16
-        if precision in ["torch.bfloat16", "bfloat16"]:
-            return Precision.bfloat16
-        return Precision.Unknown
-
-# Column selection
-COLS = [c.name for c in fields(AutoEvalColumn) if not c.hidden]
-
-EVAL_COLS = [c.name for c in fields(EvalQueueColumn)]
-EVAL_TYPES = [c.type for c in fields(EvalQueueColumn)]
-
-BENCHMARK_COLS = [t.value.col_name for t in Tasks]
-

src/envs.py

@@ -1,25 +0,0 @@
-import os
-
-from huggingface_hub import HfApi
-
-# Info to change for your repository
-# ----------------------------------
-TOKEN = os.environ.get("HF_TOKEN") # A read/write token for your org
-
-OWNER = "demo-leaderboard-backend" # Change to your org - don't forget to create a results and request dataset, with the correct format!
-# ----------------------------------
-
-REPO_ID = f"{OWNER}/leaderboard"
-QUEUE_REPO = f"{OWNER}/requests"
-RESULTS_REPO = f"{OWNER}/results"
-
-# If you setup a cache later, just change HF_HOME
-CACHE_PATH=os.getenv("HF_HOME", ".")
-
-# Local caches
-EVAL_REQUESTS_PATH = os.path.join(CACHE_PATH, "eval-queue")
-EVAL_RESULTS_PATH = os.path.join(CACHE_PATH, "eval-results")
-EVAL_REQUESTS_PATH_BACKEND = os.path.join(CACHE_PATH, "eval-queue-bk")
-EVAL_RESULTS_PATH_BACKEND = os.path.join(CACHE_PATH, "eval-results-bk")
-
-API = HfApi(token=TOKEN)

src/leaderboard/read_evals.py

@@ -1,196 +0,0 @@
-import glob
-import json
-import math
-import os
-from dataclasses import dataclass
-
-import dateutil
-import numpy as np
-
-from src.display.formatting import make_clickable_model
-from src.display.utils import AutoEvalColumn, ModelType, Tasks, Precision, WeightType
-from src.submission.check_validity import is_model_on_hub
-
-
-@dataclass
-class EvalResult:
-    """Represents one full evaluation. Built from a combination of the result and request file for a given run.
-    """
-    eval_name: str # org_model_precision (uid)
-    full_model: str # org/model (path on hub)
-    org: str 
-    model: str
-    revision: str # commit hash, "" if main
-    results: dict
-    precision: Precision = Precision.Unknown
-    model_type: ModelType = ModelType.Unknown # Pretrained, fine tuned, ...
-    weight_type: WeightType = WeightType.Original # Original or Adapter
-    architecture: str = "Unknown" 
-    license: str = "?"
-    likes: int = 0
-    num_params: int = 0
-    date: str = "" # submission date of request file
-    still_on_hub: bool = False
-
-    @classmethod
-    def init_from_json_file(self, json_filepath):
-        """Inits the result from the specific model result file"""
-        with open(json_filepath) as fp:
-            data = json.load(fp)
-
-        config = data.get("config")
-
-        # Precision
-        precision = Precision.from_str(config.get("model_dtype"))
-
-        # Get model and org
-        org_and_model = config.get("model_name", config.get("model_args", None))
-        org_and_model = org_and_model.split("/", 1)
-
-        if len(org_and_model) == 1:
-            org = None
-            model = org_and_model[0]
-            result_key = f"{model}_{precision.value.name}"
-        else:
-            org = org_and_model[0]
-            model = org_and_model[1]
-            result_key = f"{org}_{model}_{precision.value.name}"
-        full_model = "/".join(org_and_model)
-
-        still_on_hub, _, model_config = is_model_on_hub(
-            full_model, config.get("model_sha", "main"), trust_remote_code=True, test_tokenizer=False
-        )
-        architecture = "?"
-        if model_config is not None:
-            architectures = getattr(model_config, "architectures", None)
-            if architectures:
-                architecture = ";".join(architectures)
-
-        # Extract results available in this file (some results are split in several files)
-        results = {}
-        for task in Tasks:
-            task = task.value
-
-            # We average all scores of a given metric (not all metrics are present in all files)
-            accs = np.array([v.get(task.metric, None) for k, v in data["results"].items() if task.benchmark == k])
-            if accs.size == 0 or any([acc is None for acc in accs]):
-                continue
-
-            mean_acc = np.mean(accs) * 100.0
-            results[task.benchmark] = mean_acc
-
-        return self(
-            eval_name=result_key,
-            full_model=full_model,
-            org=org,
-            model=model,
-            results=results,
-            precision=precision,  
-            revision= config.get("model_sha", ""),
-            still_on_hub=still_on_hub,
-            architecture=architecture
-        )
-
-    def update_with_request_file(self, requests_path):
-        """Finds the relevant request file for the current model and updates info with it"""
-        request_file = get_request_file_for_model(requests_path, self.full_model, self.precision.value.name)
-
-        try:
-            with open(request_file, "r") as f:
-                request = json.load(f)
-            self.model_type = ModelType.from_str(request.get("model_type", ""))
-            self.weight_type = WeightType[request.get("weight_type", "Original")]
-            self.license = request.get("license", "?")
-            self.likes = request.get("likes", 0)
-            self.num_params = request.get("params", 0)
-            self.date = request.get("submitted_time", "")
-        except Exception:
-            print(f"Could not find request file for {self.org}/{self.model} with precision {self.precision.value.name}")
-
-    def to_dict(self):
-        """Converts the Eval Result to a dict compatible with our dataframe display"""
-        average = sum([v for v in self.results.values() if v is not None]) / len(Tasks)
-        data_dict = {
-            "eval_name": self.eval_name,  # not a column, just a save name,
-            AutoEvalColumn.precision.name: self.precision.value.name,
-            AutoEvalColumn.model_type.name: self.model_type.value.name,
-            AutoEvalColumn.model_type_symbol.name: self.model_type.value.symbol,
-            AutoEvalColumn.weight_type.name: self.weight_type.value.name,
-            AutoEvalColumn.architecture.name: self.architecture,
-            AutoEvalColumn.model.name: make_clickable_model(self.full_model),
-            AutoEvalColumn.revision.name: self.revision,
-            AutoEvalColumn.average.name: average,
-            AutoEvalColumn.license.name: self.license,
-            AutoEvalColumn.likes.name: self.likes,
-            AutoEvalColumn.params.name: self.num_params,
-            AutoEvalColumn.still_on_hub.name: self.still_on_hub,
-        }
-
-        for task in Tasks:
-            data_dict[task.value.col_name] = self.results[task.value.benchmark]
-
-        return data_dict
-
-
-def get_request_file_for_model(requests_path, model_name, precision):
-    """Selects the correct request file for a given model. Only keeps runs tagged as FINISHED"""
-    request_files = os.path.join(
-        requests_path,
-        f"{model_name}_eval_request_*.json",
-    )
-    request_files = glob.glob(request_files)
-
-    # Select correct request file (precision)
-    request_file = ""
-    request_files = sorted(request_files, reverse=True)
-    for tmp_request_file in request_files:
-        with open(tmp_request_file, "r") as f:
-            req_content = json.load(f)
-            if (
-                req_content["status"] in ["FINISHED"]
-                and req_content["precision"] == precision.split(".")[-1]
-            ):
-                request_file = tmp_request_file
-    return request_file
-
-
-def get_raw_eval_results(results_path: str, requests_path: str) -> list[EvalResult]:
-    """From the path of the results folder root, extract all needed info for results"""
-    model_result_filepaths = []
-
-    for root, _, files in os.walk(results_path):
-        # We should only have json files in model results
-        if len(files) == 0 or any([not f.endswith(".json") for f in files]):
-            continue
-
-        # Sort the files by date
-        try:
-            files.sort(key=lambda x: x.removesuffix(".json").removeprefix("results_")[:-7])
-        except dateutil.parser._parser.ParserError:
-            files = [files[-1]]
-
-        for file in files:
-            model_result_filepaths.append(os.path.join(root, file))
-
-    eval_results = {}
-    for model_result_filepath in model_result_filepaths:
-        # Creation of result
-        eval_result = EvalResult.init_from_json_file(model_result_filepath)
-        eval_result.update_with_request_file(requests_path)
-
-        # Store results of same eval together
-        eval_name = eval_result.eval_name
-        if eval_name in eval_results.keys():
-            eval_results[eval_name].results.update({k: v for k, v in eval_result.results.items() if v is not None})
-        else:
-            eval_results[eval_name] = eval_result
-
-    results = []
-    for v in eval_results.values():
-        try:
-            v.to_dict() # we test if the dict version is complete
-            results.append(v)
-        except KeyError:  # not all eval values present
-            continue
-
-    return results

src/populate.py

@@ -1,58 +0,0 @@
-import json
-import os
-
-import pandas as pd
-
-from src.display.formatting import has_no_nan_values, make_clickable_model
-from src.display.utils import AutoEvalColumn, EvalQueueColumn
-from src.leaderboard.read_evals import get_raw_eval_results
-
-
-def get_leaderboard_df(results_path: str, requests_path: str, cols: list, benchmark_cols: list) -> pd.DataFrame:
-    """Creates a dataframe from all the individual experiment results"""
-    raw_data = get_raw_eval_results(results_path, requests_path)
-    all_data_json = [v.to_dict() for v in raw_data]
-
-    df = pd.DataFrame.from_records(all_data_json)
-    df = df.sort_values(by=[AutoEvalColumn.average.name], ascending=False)
-    df = df[cols].round(decimals=2)
-
-    # filter out if any of the benchmarks have not been produced
-    df = df[has_no_nan_values(df, benchmark_cols)]
-    return df
-
-
-def get_evaluation_queue_df(save_path: str, cols: list) -> list[pd.DataFrame]:
-    """Creates the different dataframes for the evaluation queues requestes"""
-    entries = [entry for entry in os.listdir(save_path) if not entry.startswith(".")]
-    all_evals = []
-
-    for entry in entries:
-        if ".json" in entry:
-            file_path = os.path.join(save_path, entry)
-            with open(file_path) as fp:
-                data = json.load(fp)
-
-            data[EvalQueueColumn.model.name] = make_clickable_model(data["model"])
-            data[EvalQueueColumn.revision.name] = data.get("revision", "main")
-
-            all_evals.append(data)
-        elif ".md" not in entry:
-            # this is a folder
-            sub_entries = [e for e in os.listdir(f"{save_path}/{entry}") if not e.startswith(".")]
-            for sub_entry in sub_entries:
-                file_path = os.path.join(save_path, entry, sub_entry)
-                with open(file_path) as fp:
-                    data = json.load(fp)
-
-                data[EvalQueueColumn.model.name] = make_clickable_model(data["model"])
-                data[EvalQueueColumn.revision.name] = data.get("revision", "main")
-                all_evals.append(data)
-
-    pending_list = [e for e in all_evals if e["status"] in ["PENDING", "RERUN"]]
-    running_list = [e for e in all_evals if e["status"] == "RUNNING"]
-    finished_list = [e for e in all_evals if e["status"].startswith("FINISHED") or e["status"] == "PENDING_NEW_EVAL"]
-    df_pending = pd.DataFrame.from_records(pending_list, columns=cols)
-    df_running = pd.DataFrame.from_records(running_list, columns=cols)
-    df_finished = pd.DataFrame.from_records(finished_list, columns=cols)
-    return df_finished[cols], df_running[cols], df_pending[cols]

src/submission/check_validity.py

@@ -1,99 +0,0 @@
-import json
-import os
-import re
-from collections import defaultdict
-from datetime import datetime, timedelta, timezone
-
-import huggingface_hub
-from huggingface_hub import ModelCard
-from huggingface_hub.hf_api import ModelInfo
-from transformers import AutoConfig
-from transformers.models.auto.tokenization_auto import AutoTokenizer
-
-def check_model_card(repo_id: str) -> tuple[bool, str]:
-    """Checks if the model card and license exist and have been filled"""
-    try:
-        card = ModelCard.load(repo_id)
-    except huggingface_hub.utils.EntryNotFoundError:
-        return False, "Please add a model card to your model to explain how you trained/fine-tuned it."
-
-    # Enforce license metadata
-    if card.data.license is None:
-        if not ("license_name" in card.data and "license_link" in card.data):
-            return False, (
-                "License not found. Please add a license to your model card using the `license` metadata or a"
-                " `license_name`/`license_link` pair."
-            )
-
-    # Enforce card content
-    if len(card.text) < 200:
-        return False, "Please add a description to your model card, it is too short."
-
-    return True, ""
-
-def is_model_on_hub(model_name: str, revision: str, token: str = None, trust_remote_code=False, test_tokenizer=False) -> tuple[bool, str]:
-    """Checks if the model model_name is on the hub, and whether it (and its tokenizer) can be loaded with AutoClasses."""
-    try:
-        config = AutoConfig.from_pretrained(model_name, revision=revision, trust_remote_code=trust_remote_code, token=token)
-        if test_tokenizer:
-            try:
-                tk = AutoTokenizer.from_pretrained(model_name, revision=revision, trust_remote_code=trust_remote_code, token=token)
-            except ValueError as e:
-                return (
-                    False,
-                    f"uses a tokenizer which is not in a transformers release: {e}",
-                    None
-                )
-            except Exception as e:
-                return (False, "'s tokenizer cannot be loaded. Is your tokenizer class in a stable transformers release, and correctly configured?", None)
-        return True, None, config
-
-    except ValueError:
-        return (
-            False,
-            "needs to be launched with `trust_remote_code=True`. For safety reason, we do not allow these models to be automatically submitted to the leaderboard.",
-            None
-        )
-
-    except Exception as e:
-        return False, "was not found on hub!", None
-
-
-def get_model_size(model_info: ModelInfo, precision: str):
-    """Gets the model size from the configuration, or the model name if the configuration does not contain the information."""
-    try:
-        model_size = round(model_info.safetensors["total"] / 1e9, 3)
-    except (AttributeError, TypeError):
-        return 0  # Unknown model sizes are indicated as 0, see NUMERIC_INTERVALS in app.py
-
-    size_factor = 8 if (precision == "GPTQ" or "gptq" in model_info.modelId.lower()) else 1
-    model_size = size_factor * model_size
-    return model_size
-
-def get_model_arch(model_info: ModelInfo):
-    """Gets the model architecture from the configuration"""
-    return model_info.config.get("architectures", "Unknown")
-
-def already_submitted_models(requested_models_dir: str) -> set[str]:
-    """Gather a list of already submitted models to avoid duplicates"""
-    depth = 1
-    file_names = []
-    users_to_submission_dates = defaultdict(list)
-
-    for root, _, files in os.walk(requested_models_dir):
-        current_depth = root.count(os.sep) - requested_models_dir.count(os.sep)
-        if current_depth == depth:
-            for file in files:
-                if not file.endswith(".json"):
-                    continue
-                with open(os.path.join(root, file), "r") as f:
-                    info = json.load(f)
-                    file_names.append(f"{info['model']}_{info['revision']}_{info['precision']}")
-
-                    # Select organisation
-                    if info["model"].count("/") == 0 or "submitted_time" not in info:
-                        continue
-                    organisation, _ = info["model"].split("/")
-                    users_to_submission_dates[organisation].append(info["submitted_time"])
-
-    return set(file_names), users_to_submission_dates

src/submission/submit.py

@@ -1,119 +0,0 @@
-import json
-import os
-from datetime import datetime, timezone
-
-from src.display.formatting import styled_error, styled_message, styled_warning
-from src.envs import API, EVAL_REQUESTS_PATH, TOKEN, QUEUE_REPO
-from src.submission.check_validity import (
-    already_submitted_models,
-    check_model_card,
-    get_model_size,
-    is_model_on_hub,
-)
-
-REQUESTED_MODELS = None
-USERS_TO_SUBMISSION_DATES = None
-
-def add_new_eval(
-    model: str,
-    base_model: str,
-    revision: str,
-    precision: str,
-    weight_type: str,
-    model_type: str,
-):
-    global REQUESTED_MODELS
-    global USERS_TO_SUBMISSION_DATES
-    if not REQUESTED_MODELS:
-        REQUESTED_MODELS, USERS_TO_SUBMISSION_DATES = already_submitted_models(EVAL_REQUESTS_PATH)
-
-    user_name = ""
-    model_path = model
-    if "/" in model:
-        user_name = model.split("/")[0]
-        model_path = model.split("/")[1]
-
-    precision = precision.split(" ")[0]
-    current_time = datetime.now(timezone.utc).strftime("%Y-%m-%dT%H:%M:%SZ")
-
-    if model_type is None or model_type == "":
-        return styled_error("Please select a model type.")
-
-    # Does the model actually exist?
-    if revision == "":
-        revision = "main"
-
-    # Is the model on the hub?
-    if weight_type in ["Delta", "Adapter"]:
-        base_model_on_hub, error, _ = is_model_on_hub(model_name=base_model, revision=revision, token=TOKEN, test_tokenizer=True)
-        if not base_model_on_hub:
-            return styled_error(f'Base model "{base_model}" {error}')
-
-    if not weight_type == "Adapter":
-        model_on_hub, error, _ = is_model_on_hub(model_name=model, revision=revision, token=TOKEN, test_tokenizer=True)
-        if not model_on_hub:
-            return styled_error(f'Model "{model}" {error}')
-
-    # Is the model info correctly filled?
-    try:
-        model_info = API.model_info(repo_id=model, revision=revision)
-    except Exception:
-        return styled_error("Could not get your model information. Please fill it up properly.")
-
-    model_size = get_model_size(model_info=model_info, precision=precision)
-
-    # Were the model card and license filled?
-    try:
-        license = model_info.cardData["license"]
-    except Exception:
-        return styled_error("Please select a license for your model")
-
-    modelcard_OK, error_msg = check_model_card(model)
-    if not modelcard_OK:
-        return styled_error(error_msg)
-
-    # Seems good, creating the eval
-    print("Adding new eval")
-
-    eval_entry = {
-        "model": model,
-        "base_model": base_model,
-        "revision": revision,
-        "precision": precision,
-        "weight_type": weight_type,
-        "status": "PENDING",
-        "submitted_time": current_time,
-        "model_type": model_type,
-        "likes": model_info.likes,
-        "params": model_size,
-        "license": license,
-        "private": False,
-    }
-
-    # Check for duplicate submission
-    if f"{model}_{revision}_{precision}" in REQUESTED_MODELS:
-        return styled_warning("This model has been already submitted.")
-
-    print("Creating eval file")
-    OUT_DIR = f"{EVAL_REQUESTS_PATH}/{user_name}"
-    os.makedirs(OUT_DIR, exist_ok=True)
-    out_path = f"{OUT_DIR}/{model_path}_eval_request_False_{precision}_{weight_type}.json"
-
-    with open(out_path, "w") as f:
-        f.write(json.dumps(eval_entry))
-
-    print("Uploading eval file")
-    API.upload_file(
-        path_or_fileobj=out_path,
-        path_in_repo=out_path.split("eval-queue/")[1],
-        repo_id=QUEUE_REPO,
-        repo_type="dataset",
-        commit_message=f"Add {model} to eval queue",
-    )
-
-    # Remove the local file
-    os.remove(out_path)
-
-    return styled_message(
-        "Your request has been submitted to the evaluation queue!\nPlease wait for up to an hour for the model to show in the PENDING list."
-    )