Spaces:
Sleeping
Sleeping
JadAssaf
commited on
Commit
•
1110093
1
Parent(s):
7f56996
init
Browse files- .DS_Store +0 -0
- TSPI_model_joblib.sav +0 -0
- app.py +58 -0
- load_model.py +4 -0
- requirements.txt +7 -0
- stpi_data.txt +1 -0
.DS_Store
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Binary file (6.15 kB). View file
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TSPI_model_joblib.sav
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Binary file (88.6 kB). View file
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app.py
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# %%
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import gradio as gr
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import joblib
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import dill
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# import pickle
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import imblearn
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import sklearn
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import xgboost
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file_name = 'TSPI_model_joblib.sav'
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model = joblib.load(file_name)
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def STPI(TS4,TS2,TS1,
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# Acc_0_5__1_0_MaxValue,
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DTS4,DTS2,DTS1):
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print('------------------')
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X = [TS4,TS2,TS1,
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# Acc_0_5__1_0_MaxValue,
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DTS4,DTS2,DTS1]
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print(X)
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outcome_decoded = ['Normal','Borderline','Suspicious','Keratoconic']
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file_object = open('stpi_data.txt', 'a')
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file_object.write(str(TS4))
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file_object.write(';')
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file_object.write(str(TS2))
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file_object.write(';')
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file_object.write(str(TS1))
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file_object.write(';')
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# file_object.write(str(Acc_0_5__1_0_MaxValue))
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# file_object.write(';')
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file_object.write(str(DTS4))
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file_object.write(';')
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file_object.write(str(DTS2))
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file_object.write(';')
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file_object.write(str(DTS1))
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file_object.write(';')
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file_object.write('\n')
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file_object.close()
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result_3way = model.predict([X])
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# print('The patient is ', outcome_decoded[int(result_3way)], 'through the 3way method')
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# result = 'The 3-way classification resulted in a ', outcome_decoded[int(result_3way)] + ' patient.'
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# further_analysis = 'Futher analysis using the 2-way classification resulted in a ' + outcome_decoded[int(result_2way)] + ' label.'
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return 'The patient is ' + outcome_decoded[int(result_3way)] + '.'
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iface = gr.Interface(
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fn=STPI,
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title='TSPI Calculator',
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description='The Thickness Speed Progression Index (TSPI) detects keratoconus and keratoconus susceptible corneas through summarized pachymetric parameters. Beta version made for Zeimer by Prof. Shady Awwad, Jad Assaf, MD, and Bassel Hammoud, MD. This is the 4-way classification.',
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inputs=["number", "number","number",
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# "number",
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"number", "number","number"],
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outputs="text")
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iface.launch(
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# share=True
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)
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# %%
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load_model.py
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import pickle
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file_name = 'TSPI_model.sav'
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model = pickle.load(open(file_name,'rb'))
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requirements.txt
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gradio==3.15.0
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imbalanced_learn==0.9.1
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imblearn==0.0
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sklearn==0.0
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xgboost==0.90
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joblib==1.2.0
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dill==0.3.6
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stpi_data.txt
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11.0;22.0;33.0;44.0;55.0;66.0;77.0
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