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import gradio as gr | |
import os | |
import numpy as np | |
from cataract import combined_prediction, save_cataract_prediction_to_db, predict_object_detection | |
from glaucoma import combined_prediction_glaucoma, submit_to_db, predict_image | |
from database import get_db_data, format_db_data, clear_database | |
from chatbot import chatbot, toggle_visibility, update_patient_history, generate_voice_response | |
from PIL import Image | |
# Define the custom theme | |
theme = gr.themes.Soft( | |
primary_hue="neutral", | |
secondary_hue="neutral", | |
neutral_hue="gray", | |
font=[gr.themes.GoogleFont('Libre Franklin'), gr.themes.GoogleFont('Public Sans'), 'system-ui', 'sans-serif'] | |
).set( | |
body_background_fill="#ffffff", | |
block_background_fill="#0a2b42", | |
block_border_width="1px", | |
block_title_background_fill="#0a2b42", | |
input_background_fill="#ffffff", | |
button_secondary_background_fill="#0a2b42", | |
border_color_primary="#800080", | |
background_fill_secondary="#ffffff", | |
color_accent_soft="transparent" | |
) | |
# Define custom CSS | |
css = """ | |
body { | |
color: #0a2b42; /* Dark blue font */ | |
} | |
.light body { | |
color: #0a2b42; /* Dark blue font */ | |
} | |
input, textarea { | |
background-color: #ffffff !important; /* White background for text boxes */ | |
color: #0a2b42 !important; /* Dark blue font for text boxes */ | |
} | |
""" | |
logo_url = "https://huggingface.co/spaces/Nexus-Community/nexus-main/resolve/main/Nexus-Hub.png" | |
db_path_cataract = "cataract_results.db" | |
db_path_glaucoma = "glaucoma_results.db" | |
def display_db_data(): | |
"""Fetch and format the data from the database for display.""" | |
glaucoma_data, cataract_data = get_db_data(db_path_glaucoma, db_path_cataract) | |
formatted_data = format_db_data(glaucoma_data, cataract_data) | |
return formatted_data | |
def check_db_status(): | |
"""Check the status of the databases and return a status message.""" | |
cataract_status = "Loaded" if os.path.exists(db_path_cataract) else "Not Loaded" | |
glaucoma_status = "Loaded" if os.path.exists(db_path_glaucoma) else "Not Loaded" | |
return f"Cataract Database: {cataract_status}\nGlaucoma Database: {glaucoma_status}" | |
def toggle_input_visibility(input_type): | |
if input_type == "Voice": | |
return gr.update(visible=True), gr.update(visible=False) | |
else: | |
return gr.update(visible=False), gr.update(visible=True) | |
def process_image(image): | |
# Run the analyzer model | |
blended_image, red_quantity, green_quantity, blue_quantity, raw_response, stage, save_message, debug_info = combined_prediction(image) | |
# Run the object detection model | |
predicted_image_od, raw_response_od = predict_object_detection(image) | |
return blended_image, red_quantity, green_quantity, blue_quantity, raw_response, stage, save_message, debug_info, predicted_image_od, raw_response_od | |
with gr.Blocks(theme=theme) as demo: | |
gr.HTML(f"<img src='{logo_url}' alt='Logo' width='150'/>") | |
gr.Markdown("## Wellness-Nexus V.1.0") | |
gr.Markdown("This app helps people to diagnose their cataract and glaucoma, both respectively #1 and #2 cause of blindness in the world. You could try our diagnostic model by downloading test image on our Huggingface Repo File") | |
with gr.Tab("Cataract Screener and Analyzer"): | |
with gr.Row(): | |
image_input = gr.Image(type="numpy", label="Upload an Image") | |
submit_btn = gr.Button("Submit") | |
gr.Examples([["test-cataract-image.jpg"]], inputs=[image_input],label='Or use one of these examples:') | |
with gr.Row(): | |
segmented_image_cataract = gr.Image(type="numpy", label="Segmented Image") | |
predicted_image_od = gr.Image(type="numpy", label="Predicted Image") | |
with gr.Column(): | |
red_quantity_cataract = gr.Slider(label="Red Quantity", minimum=0, maximum=255, interactive=False) | |
green_quantity_cataract = gr.Slider(label="Green Quantity", minimum=0, maximum=255, interactive=False) | |
blue_quantity_cataract = gr.Slider(label="Blue Quantity", minimum=0, maximum=255, interactive=False) | |
with gr.Row(): | |
cataract_stage = gr.Textbox(label="Cataract Stage", interactive=False) | |
raw_response_cataract = gr.Textbox(label="Raw Response", interactive=False) | |
submit_value_btn_cataract = gr.Button("Submit Values to Database") | |
db_response_cataract = gr.Textbox(label="Database Response") | |
debug_cataract = gr.Textbox(label="Debug Message", interactive=False) | |
submit_btn.click( | |
process_image, | |
inputs=image_input, | |
outputs=[ | |
segmented_image_cataract, red_quantity_cataract, green_quantity_cataract, blue_quantity_cataract, raw_response_cataract, cataract_stage, db_response_cataract, debug_cataract, predicted_image_od | |
] | |
) | |
submit_value_btn_cataract.click( | |
lambda img, red, green, blue, stage: save_cataract_prediction_to_db(Image.fromarray(img), red, green, blue, stage), | |
inputs=[segmented_image_cataract, red_quantity_cataract, green_quantity_cataract, blue_quantity_cataract, cataract_stage], | |
outputs=[db_response_cataract, debug_cataract] | |
) | |
with gr.Tab("Glaucoma Analyzer and Screener"): | |
with gr.Row(): | |
image_input = gr.Image(type="numpy", label="Upload an Image") | |
mask_threshold_slider = gr.Slider(minimum=0.0, maximum=1.0, step=0.01, value=0.5, label="Mask Threshold") | |
gr.Examples([["test-glaucoma-image.jpg"]], inputs=[image_input],label='Or use one of these examples:') | |
with gr.Row(): | |
submit_btn_segmentation = gr.Button("Submit Segmentation") | |
submit_btn_od = gr.Button("Submit Object Detection") | |
with gr.Row(): | |
segmented_image = gr.Image(type="numpy", label="Segmented Image") | |
predicted_image_od = gr.Image(type="numpy", label="Predicted Image") | |
with gr.Row(): | |
raw_response_od = gr.Textbox(label="Raw Result") | |
with gr.Column(): | |
cup_area = gr.Textbox(label="Cup Area") | |
disk_area = gr.Textbox(label="Disk Area") | |
rim_area = gr.Textbox(label="Rim Area") | |
rim_to_disc_ratio = gr.Textbox(label="Rim to Disc Ratio") | |
ddls_stage = gr.Textbox(label="DDLS Stage") | |
with gr.Column(): | |
submit_value_btn = gr.Button("Submit Values to Database") | |
db_response = gr.Textbox(label="Database Response") | |
debug_glaucoma = gr.Textbox(label="Debug Message", interactive=False) | |
def process_segmentation_image(img, mask_thresh): | |
# Run the segmentation model | |
return combined_prediction_glaucoma(img, mask_thresh) | |
def process_od_image(img): | |
# Run the object detection model | |
image_with_boxes, raw_predictions = predict_image(img) | |
return image_with_boxes, raw_predictions | |
submit_btn_segmentation.click( | |
fn=process_segmentation_image, | |
inputs=[image_input, mask_threshold_slider], | |
outputs=[ | |
segmented_image, cup_area, disk_area, rim_area, rim_to_disc_ratio, ddls_stage | |
] | |
) | |
submit_btn_od.click( | |
fn=process_od_image, | |
inputs=[image_input], | |
outputs=[ | |
predicted_image_od, raw_response_od | |
] | |
) | |
submit_value_btn.click( | |
lambda img, cup, disk, rim, ratio, stage: submit_to_db(img, cup, disk, rim, ratio, stage), | |
inputs=[image_input, cup_area, disk_area, rim_area, rim_to_disc_ratio, ddls_stage], | |
outputs=[db_response, debug_glaucoma] | |
) | |
with gr.Tab("Chatbot"): | |
with gr.Row(): | |
input_type_dropdown = gr.Dropdown(label="Input Type", choices=["Voice", "Text"], value="Voice") | |
tts_model_dropdown = gr.Dropdown(label="TTS Model", choices=["Ryan (ESPnet)", "Nithu (Custom)"], value="Nithu (Custom)") | |
submit_btn_chatbot = gr.Button("Submit") | |
with gr.Row(): | |
audio_input = gr.Audio(type="filepath", label="Record your voice", visible=True) | |
text_input = gr.Textbox(label="Type your question", visible=False) | |
with gr.Row(): | |
answer_textbox = gr.Textbox(label="Answer") | |
answer_audio = gr.Audio(label="Answer as Speech", type="filepath") | |
generate_voice_btn = gr.Button("Generate Voice Response") | |
with gr.Row(): | |
log_messages_textbox = gr.Textbox(label="Log Messages", lines=10) | |
db_status_textbox = gr.Textbox(label="Database Status", interactive=False) | |
input_type_dropdown.change( | |
fn=toggle_input_visibility, | |
inputs=[input_type_dropdown], | |
outputs=[audio_input, text_input] | |
) | |
submit_btn_chatbot.click( | |
fn=chatbot, | |
inputs=[audio_input, input_type_dropdown, text_input], | |
outputs=[answer_textbox, db_status_textbox] | |
) | |
generate_voice_btn.click( | |
fn=generate_voice_response, | |
inputs=[tts_model_dropdown, answer_textbox], | |
outputs=[answer_audio, db_status_textbox] | |
) | |
fetch_db_btn = gr.Button("Fetch Database") | |
fetch_db_btn.click( | |
fn=update_patient_history, | |
inputs=[], | |
outputs=[db_status_textbox] | |
) | |
with gr.Tab("Database Upload and View"): | |
gr.Markdown("### Store and Retrieve Context Information") | |
db_display = gr.HTML() | |
load_db_btn = gr.Button("Load Database Content") | |
load_db_btn.click(display_db_data, outputs=db_display) | |
# Buttons to clear databases | |
clear_cataract_db_btn = gr.Button("Clear Cataract Database") | |
clear_glaucoma_db_btn = gr.Button("Clear Glaucoma Database") | |
clear_cataract_db_btn.click( | |
fn=clear_database, | |
inputs=[gr.State(value=db_path_cataract), gr.State(value="cataract_results")], | |
outputs=db_display | |
) | |
clear_glaucoma_db_btn.click( | |
fn=clear_database, | |
inputs=[gr.State(value=db_path_glaucoma), gr.State(value="results")], | |
outputs=db_display | |
) | |
demo.launch() |