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import sqlite3 | |
from io import BytesIO | |
import base64 | |
def create_connection(db_file): | |
""" Create a database connection to the SQLite database """ | |
conn = None | |
try: | |
conn = sqlite3.connect(db_file) | |
return conn | |
except sqlite3.Error as e: | |
print(e) | |
return conn | |
def create_table(conn): | |
""" Create the results tables if they do not exist """ | |
create_glaucoma_table_sql = """ CREATE TABLE IF NOT EXISTS results ( | |
id integer PRIMARY KEY, | |
image blob, | |
cup_area real, | |
disk_area real, | |
rim_area real, | |
rim_to_disc_line_ratio real, | |
ddls_stage integer | |
); """ | |
create_cataract_table_sql = """ CREATE TABLE IF NOT EXISTS cataract_results ( | |
id integer PRIMARY KEY, | |
image blob, | |
red_quantity real, | |
green_quantity real, | |
blue_quantity real, | |
stage text | |
); """ | |
try: | |
cursor = conn.cursor() | |
cursor.execute(create_glaucoma_table_sql) | |
cursor.execute(create_cataract_table_sql) | |
except sqlite3.Error as e: | |
print(e) | |
def save_prediction_to_db(image, cup_area, disk_area, rim_area, rim_to_disc_line_ratio, ddls_stage): | |
database = "glaucoma_results.db" | |
conn = create_connection(database) | |
if conn: | |
create_table(conn) | |
sql = ''' INSERT INTO results(image, cup_area, disk_area, rim_area, rim_to_disc_line_ratio, ddls_stage) | |
VALUES(?,?,?,?,?,?) ''' | |
cur = conn.cursor() | |
# Convert the image to bytes | |
buffered = BytesIO() | |
image.save(buffered, format="PNG") | |
img_bytes = buffered.getvalue() | |
cur.execute(sql, (img_bytes, cup_area, disk_area, rim_area, rim_to_disc_line_ratio, ddls_stage)) | |
conn.commit() | |
conn.close() | |
def fetch_all_data(conn, table_name): | |
""" Fetch all data from the given table """ | |
cursor = conn.cursor() | |
cursor.execute(f"SELECT * FROM {table_name}") | |
rows = cursor.fetchall() | |
return rows | |
def get_db_data(db_path_glaucoma, db_path_cataract): | |
conn_glaucoma = create_connection(db_path_glaucoma) | |
conn_cataract = create_connection(db_path_cataract) | |
if conn_glaucoma and conn_cataract: | |
create_table(conn_glaucoma) | |
create_table(conn_cataract) | |
glaucoma_data = fetch_all_data(conn_glaucoma, "results") | |
cataract_data = fetch_all_data(conn_cataract, "cataract_results") | |
conn_glaucoma.close() | |
conn_cataract.close() | |
return glaucoma_data, cataract_data | |
else: | |
return [], [] | |
def format_db_data(glaucoma_data, cataract_data, context_data): | |
""" Format the database data for display """ | |
formatted_data = "" | |
if not glaucoma_data and not cataract_data: | |
return "No data available in the database." | |
if glaucoma_data: | |
headers = ["ID", "Image", "Cup Area", "Disk Area", "Rim Area", "Rim to Disc Line Ratio", "DDLS Stage"] | |
formatted_data += "<h2>Glaucoma Data</h2><table border='1'><tr>" + "".join([f"<th>{header}</th>" for header in headers]) + "</tr>" | |
for row in glaucoma_data: | |
image_html = "No image" | |
if row[1] is not None: | |
image = base64.b64encode(row[1]).decode('utf-8') | |
image_html = f"<img src='data:image/png;base64,{image}' width='100'/>" | |
formatted_data += "<tr>" + "".join([f"<td>{image_html if i == 1 else row[i]}</td>" for i in range(len(row))]) + "</tr>" | |
formatted_data += "</table>" | |
if cataract_data: | |
headers = ["ID", "Image", "Red Quantity", "Green Quantity", "Blue Quantity", "Stage"] | |
formatted_data += "<h2>Cataract Data</h2><table border='1'><tr>" + "".join([f"<th>{header}</th>" for header in headers]) + "</tr>" | |
for row in cataract_data: | |
image_html = "No image" | |
if row[1] is not None: | |
image = base64.b64encode(row[1]).decode('utf-8') | |
image_html = f"<img src='data:image/png;base64,{image}' width='100'/>" | |
formatted_data += "<tr>" + "".join([f"<td>{image_html if i == 1 else row[i]}</td>" for i in range(len(row))]) + "</tr>" | |
formatted_data += "</table>" | |
return formatted_data |