diff --git "a/mlip_arena/tasks/diatomics/run.ipynb" "b/mlip_arena/tasks/diatomics/run.ipynb" --- "a/mlip_arena/tasks/diatomics/run.ipynb" +++ "b/mlip_arena/tasks/diatomics/run.ipynb" @@ -2,7 +2,7 @@ "cells": [ { "cell_type": "code", - "execution_count": 3, + "execution_count": 9, "id": "3200850a-b8fb-4f50-9815-16ae8da0f942", "metadata": { "tags": [] @@ -19,6 +19,7 @@ "from ase.io import read, write\n", "from pymatgen.core import Element\n", "from scipy import stats\n", + "from scipy.interpolate import splrep, BSpline, CubicSpline, UnivariateSpline\n", "from tqdm.auto import tqdm\n", "\n", "from mlip_arena.models import MLIPEnum, REGISTRY\n", @@ -26,9 +27,20 @@ "%matplotlib inline" ] }, + { + "cell_type": "markdown", + "id": "02ff9cf9-49a2-4cec-80d3-56c6661a513b", + "metadata": { + "jp-MarkdownHeadingCollapsed": true, + "tags": [] + }, + "source": [ + "# Compute MLIP homonuclear diatomics" + ] + }, { "cell_type": "code", - "execution_count": 7, + "execution_count": 2, "id": "90887faa-1601-4c4c-9c44-d16731471d7f", "metadata": { "scrolled": true, @@ -39,20 +51,17 @@ "name": "stdout", "output_type": "stream", "text": [ - "========== eqV2(OMat) ==========\n" - ] - }, - { - "name": "stderr", - "output_type": "stream", - "text": [ - "WARNING:root:Couldn't modify the submission pickle with error: [Errno 2] No such file or directory: '/fsx-ocp-med/lbluque/logs/omat-alex-mp/S2EFS/train/4460394/32006266_submitted.pkl'\n" + "========== ORBv2 ==========\n", + "Selected GPU cuda:0 with 40339.31 MB free memory from 1 GPUs\n", + "Downloading ORB model from https://storage.googleapis.com/orbitalmaterials-public-models/forcefields/orb-v2-20241011.ckpt to /global/homes/c/cyrusyc/.cache/orb/orb-v2-20241011.ckpt...\n", + "Download completed.\n", + "GPU tensorfloat matmuls precision set to 'high'. This can achieve up to 2x speedup on Nvidia A100 and H100 devices.\n" ] }, { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "e77f2270a8f34d81b65cab9852bab94c", + "model_id": "fde27645a0014db6a912f33d326114d4", "version_major": 2, "version_minor": 0 }, @@ -67,13 +76,13 @@ "name": "stdout", "output_type": "stream", "text": [ - "Atoms(symbols='H2', pbc=True, cell=[7.4399999999999995, 7.441, 7.441999999999999], calculator=SinglePointCalculator(...))\n" + "Atoms(symbols='H2', pbc=True, cell=[7.4399999999999995, 7.441, 7.441999999999999])\n" ] }, { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "33161320d6e5493ab57a0848eb1395a5", + "model_id": "9d4f8778428e4bd598f23ce61c747345", "version_major": 2, "version_minor": 0 }, @@ -88,13 +97,13 @@ "name": "stdout", "output_type": "stream", "text": [ - "Atoms(symbols='He2', pbc=True, cell=[8.866, 8.866999999999999, 8.868], calculator=SinglePointCalculator(...))\n" + "Atoms(symbols='He2', pbc=True, cell=[8.866, 8.866999999999999, 8.868])\n" ] }, { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "4109a21a613a448a94f4667dd7383747", + "model_id": "ff1558c5b9ca4ad6b919557f9d778bec", "version_major": 2, "version_minor": 0 }, @@ -115,7 +124,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "5c0588112db2428bac40c25c24530e67", + "model_id": "a2fc840fbaf34da68b4976580e1dab40", "version_major": 2, "version_minor": 0 }, @@ -136,7 +145,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "cc5d8bcc3a49475fb01984ca4c768bee", + "model_id": "8b5474352be645b09d3d0bad807c97bd", "version_major": 2, "version_minor": 0 }, @@ -157,7 +166,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "66d7e64e73394dc39a66ab3596fec3ca", + "model_id": "aebd7ee1c5dd4fb69bba40c3bba0a27b", "version_major": 2, "version_minor": 0 }, @@ -178,7 +187,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "8a6fa1e6419b4987ac7430e62b76234d", + "model_id": "a38618e62b3c45ddbf00e3c84f58df2f", "version_major": 2, "version_minor": 0 }, @@ -199,7 +208,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "ef48b0b0e9904154823ab0d01bd44376", + "model_id": "e1de9a9c513340a58d2eb60f1262f2d3", "version_major": 2, "version_minor": 0 }, @@ -220,7 +229,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "cafa0ec9fa784f25a2f64d8c76496593", + "model_id": "cf3a832303f04afeab0e29d48e743356", "version_major": 2, "version_minor": 0 }, @@ -241,7 +250,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "21d27eaeee9848798b9f819da5326c05", + "model_id": "54d5361dc0a64d2daf100360ae89cba2", "version_major": 2, "version_minor": 0 }, @@ -262,7 +271,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "f1a5036eebaa4e7c9601bc2ded6e7347", + "model_id": "421fcce8471c4499a9a2e8b41d38d102", "version_major": 2, "version_minor": 0 }, @@ -283,7 +292,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "759939e385084be58faa4e41c6cc2648", + "model_id": "97f89a8ca8ce489ab1de25ae0c428a92", "version_major": 2, "version_minor": 0 }, @@ -304,7 +313,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "96a4ffb0515f45539e6de783c39cd398", + "model_id": "c1290ac80bf74eb5ba072e03317144e4", "version_major": 2, "version_minor": 0 }, @@ -325,7 +334,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "592e2b487edd47c1b0a4165064533689", + "model_id": "567744cfe2954b01a581aa778a45109f", "version_major": 2, "version_minor": 0 }, @@ -346,7 +355,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "4f5ee68259a64c76beda1adc163a6cbd", + "model_id": "b6b9bbd6706c41f09695a0fe345f7a3a", "version_major": 2, "version_minor": 0 }, @@ -367,7 +376,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "cb5f6ecb3ca74d50b75430a0c388ad6f", + "model_id": "ede2f160e8554f36904597d8ff21232e", "version_major": 2, "version_minor": 0 }, @@ -388,7 +397,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "25b6bd606d7347ccbbc065dbac275f71", + "model_id": "2dba742b038a4238805f519f96835792", "version_major": 2, "version_minor": 0 }, @@ -409,7 +418,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "416c99cd3f864f419cd0184960a4155b", + "model_id": "569072aae3c04e388ce6832c9e82ad76", "version_major": 2, "version_minor": 0 }, @@ -430,7 +439,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "6bf463d79e45467bb5b64a129a86e03e", + "model_id": "1582c4c2caac43db9af52bae15fe537b", "version_major": 2, "version_minor": 0 }, @@ -451,7 +460,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "e0197e568746415eb890d89cd0bbeaa3", + "model_id": "b379f4013cd64888a6e4256bcc8336b8", "version_major": 2, "version_minor": 0 }, @@ -472,7 +481,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "3acd1fa6108947b2bb14edf0999c89ab", + "model_id": "5c8e740c3436469bb6462cdc604ceb94", "version_major": 2, "version_minor": 0 }, @@ -493,7 +502,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "bec7223da3404c3a9da1cffeba23286f", + "model_id": "4e838599d9024341a42715245b7431fb", "version_major": 2, "version_minor": 0 }, @@ -514,7 +523,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "b25ebdf58a274614a1cecf32328f5164", + "model_id": "6664436826a24f6eac97a860c7b8b9f6", "version_major": 2, "version_minor": 0 }, @@ -535,7 +544,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "c5ce66b45fdd4bac8dd69caf7b6a8a6f", + "model_id": "59b9ddad40ae491a801288d215d8d23e", "version_major": 2, "version_minor": 0 }, @@ -556,7 +565,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "b094adadc86849238da83396b6e818f3", + "model_id": "4a2b5560ce354ac793ae948a42b5252a", "version_major": 2, "version_minor": 0 }, @@ -577,7 +586,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "60b9c56384d1403da19808c5b5410c40", + "model_id": "833225306e2649888642acfd339316de", "version_major": 2, "version_minor": 0 }, @@ -598,7 +607,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "eb13c83599ac439a886b1b39ab9e3219", + "model_id": "8662d5902ab14029a9f569bef1853ded", "version_major": 2, "version_minor": 0 }, @@ -619,7 +628,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "74d387a976ac45518667180f5f1d7dca", + "model_id": "0dc8dd7ad5eb4fef8f25a8cb90503a03", "version_major": 2, "version_minor": 0 }, @@ -640,7 +649,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "49a1583cdbc649729d9d30ba63c140d3", + "model_id": "f985a89ddcd74c569ac80beea4cdfc4d", "version_major": 2, "version_minor": 0 }, @@ -661,7 +670,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "0e3c31876fed4ecdac47b797c62dc08e", + "model_id": "4607486bfaaf41828b4633d273c145a5", "version_major": 2, "version_minor": 0 }, @@ -682,7 +691,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "7f9e6fa0a05c4344bd68cf58f0a9816e", + "model_id": "77fd598603094c5fadf539f8e35a8a8b", "version_major": 2, "version_minor": 0 }, @@ -703,7 +712,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "ad3c78bdf5af4d1fa90eab5f10ba2bde", + "model_id": "50e676dfa8304d0194fbd5affff2bdd4", "version_major": 2, "version_minor": 0 }, @@ -724,7 +733,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "a7fdb11ede9544e59987eea70e559d86", + "model_id": "e6855106c33248da950626955461a268", "version_major": 2, "version_minor": 0 }, @@ -745,7 +754,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "c633a1308e304dae9dda69ad84a96989", + "model_id": "ababe6cc711a410fb8148aeffbdfa5bf", "version_major": 2, "version_minor": 0 }, @@ -766,7 +775,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "34b3b4bb2fbb40df91e7c2444b2ce942", + "model_id": "7d6a14bafa5049148bae6455d06de998", "version_major": 2, "version_minor": 0 }, @@ -787,7 +796,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "7ea332ea894447e5ae593a6cb1b56c7a", + "model_id": "fb44546f41824f5b8e2aefa9f9cd2e31", "version_major": 2, "version_minor": 0 }, @@ -808,7 +817,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "27f59e0b042745b89fa04a0df01201a0", + "model_id": "884a859383bc4d96b1eaeec2be5bb0e5", "version_major": 2, "version_minor": 0 }, @@ -829,7 +838,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "10031ad6ac8446be81d9ee42aa7c630e", + "model_id": "ab3dc18564434454961bdfc7ddf3f2a1", "version_major": 2, "version_minor": 0 }, @@ -850,7 +859,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "9b33442f8a80462f9e8cc8426fc933e8", + "model_id": "4e40d91bf9d148629f85d56ad967710b", "version_major": 2, "version_minor": 0 }, @@ -871,7 +880,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "964912428a9f4b6888e86e77a056a278", + "model_id": "01608f2e6626449898900a6dad483acc", "version_major": 2, "version_minor": 0 }, @@ -892,7 +901,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "99995c462de64ee886cd1ce508ca7b32", + "model_id": "8dcf5cc037e94375818777de398c2d24", "version_major": 2, "version_minor": 0 }, @@ -913,7 +922,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "fe0eb64e91bd4f98ac3bfbeb630762ce", + "model_id": "8e7a0b6a8b544fb598240631538cd7a3", "version_major": 2, "version_minor": 0 }, @@ -934,7 +943,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "5a1890a3879a488aa47630c7cb2cb7d3", + "model_id": "71b31444bf6646f0a1a84bf0464f225a", "version_major": 2, "version_minor": 0 }, @@ -955,7 +964,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "76815ec05cc4495cbf8ce252865fbdc5", + "model_id": "d3bed70c3fe9404f9bbc868618c50dab", "version_major": 2, "version_minor": 0 }, @@ -976,7 +985,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "e5885834967a44d8927faad4458ce7c6", + "model_id": "4ce482eb55a043bcb81b8cf9ee8a42af", "version_major": 2, "version_minor": 0 }, @@ -997,7 +1006,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "9ab9223fdc0540c890ec01b16c6e2b7f", + "model_id": "feedd3d7b8d2493b824e09bce300e2c3", "version_major": 2, "version_minor": 0 }, @@ -1018,7 +1027,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "d3396aed00b744d0afb663cc50d721d4", + "model_id": "ef587ac0902348d68bb78364ad379165", "version_major": 2, "version_minor": 0 }, @@ -1039,7 +1048,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "1b45e3364bca474ebbe35e3151e95f5b", + "model_id": "616e3d8ac06c4826bef27d337a20c7e6", "version_major": 2, "version_minor": 0 }, @@ -1060,7 +1069,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "375c045215b247bba8adc37561f8073c", + "model_id": "54f9e24b319046ecba5d6bd62b8cd662", "version_major": 2, "version_minor": 0 }, @@ -1081,7 +1090,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "223a9efce99d4fef9ae48b6a2b5d2973", + "model_id": "56edd2b635d24ba495626324f6077065", "version_major": 2, "version_minor": 0 }, @@ -1102,7 +1111,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "d46cec3a59b04c28b09c53565784ed1b", + "model_id": "cc135ebe00e6443e89c0565ee0680e76", "version_major": 2, "version_minor": 0 }, @@ -1123,7 +1132,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "ae2e54fb70d849aea94f03960e144bc0", + "model_id": "8e50b6e60ca640b086f33edd09f97dbb", "version_major": 2, "version_minor": 0 }, @@ -1144,7 +1153,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "556beb20e06b4494b4a9cedecc7d1bb2", + "model_id": "acc607f35cb844178be29faf2e712b21", "version_major": 2, "version_minor": 0 }, @@ -1165,7 +1174,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "580220c5d9f84ddeba2d107cebc27388", + "model_id": "ef9f4b157e61406a95359c776711d52a", "version_major": 2, "version_minor": 0 }, @@ -1186,7 +1195,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "b223a63423b84d1b9aed015ab28aa74d", + "model_id": "1d7fb4f6cd124c8cbe02f8942709b0c3", "version_major": 2, "version_minor": 0 }, @@ -1207,7 +1216,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "222cba83b3f244de88155582bea72e79", + "model_id": "9943ad6d333542cbb84249203c401c27", "version_major": 2, "version_minor": 0 }, @@ -1228,7 +1237,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "cdcb3bdf95c84fa5a9fcd1aadbc360f5", + "model_id": "7aaf77a953144904a0a1d86bad9c866f", "version_major": 2, "version_minor": 0 }, @@ -1249,7 +1258,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "59f93f3830504b5c8b1f31fdcb271391", + "model_id": "b0bfc84280b64a06972ee896e0d4f010", "version_major": 2, "version_minor": 0 }, @@ -1270,7 +1279,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "c3ab174f1c404215b8a1fdf75826fd2e", + "model_id": "9ab65f160377460daf32179e34c99284", "version_major": 2, "version_minor": 0 }, @@ -1291,7 +1300,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "b2c80e8cf5c54724a3f51476ddf35cb1", + "model_id": "c26dac9c092c464594d4d18e057df649", "version_major": 2, "version_minor": 0 }, @@ -1312,7 +1321,7 @@ { "data": { "application/vnd.jupyter.widget-view+json": { - "model_id": "c10a80c6609b4ca3886b14f604b9c34d", + "model_id": "e6f36a13f7d0470babe6ef33a7babdc5", "version_major": 2, "version_minor": 0 }, @@ -1327,18 +1336,18 @@ "name": "stdout", "output_type": "stream", "text": [ - "Atoms(symbols='Pm2', pbc=True, cell=[12.0, 12.001, 12.002])\n" + "Atoms(symbols='Dy2', pbc=True, cell=[17.794, 17.795, 17.796])\n" ] }, { "data": { "application/vnd.jupyter.widget-view+json": { - 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namemethodREFS^2force-flip-timesforce-total-variationforce-jumpenergy-diff-flip-timesenergy-grad-norm-maxenergy-jumpenergy-total-variationtortuosityconservation-deviationspearman-descending-forcespearman-ascending-forcespearman-repulsion-energyspearman-attraction-energy
0HHeqV2(OMat)[3.7199999999999998, 3.70996794, 3.69993586, 3...[-2.0984511375427246, -2.095881462097168, -2.0...[9.72e-06, 7.52e-06, 3.211e-05, 3.564e-05, 3.9...[]2106.6065641.9240821793.2415880.56448818.8408631.5555872.842868-0.994359-0.072700-0.9928570.431210
1HeHeeqV2(OMat)[4.433, 4.4229736200000005, 4.41294724, 4.4029...[0.5383987426757812, 0.5361838340759277, 0.536...[-1.365e-05, -4.945e-05, -8.538e-05, -0.000155...[]2265.8168235.1866911477.2505890.69934119.4514164.16665910.740978-0.973671-0.546770-0.9121220.600920
2LiLieqV2(OMat)[6.572000000000001, 6.561981520000001, 6.55196...[-0.5126352310180664, -0.5116205215454102, -0....[-3.34e-05, 0.00016922, 0.00028867, 0.0005224,...[]128.1160900.0532383117.0857350.1815827.8664851.3342801.063989-0.9983540.976426-0.9813980.705693
3BeBeeqV2(OMat)[6.138000000000001, 6.12797338, 6.117946759999...[0.23909759521484375, 0.2400522232055664, 0.23...[-4.817e-05, 0.00051783, 0.00090912, 0.0012907...[]1188.2399960.1774903522.6728790.32879713.7354671.2757906.498375-0.9976880.983071-0.9728910.014737
4BBeqV2(OMat)[5.921000000000001, 5.91097088, 5.900941739999...[-1.388545036315918, -1.3869714736938477, -1.3...[-7.486e-05, -0.00062429, -0.00124062, -0.0016...[]1142.7881280.0106911930.7711050.57254013.6499371.1458694.867476-1.0000000.990445-0.9843790.993144
............................................................
90PaPaeqV2(OMat)[8.927999999999999, 8.91797468, 8.90794936, 8....[-8.536531448364258, -8.537920951843262, -8.55...[0.00149543, 0.00933722, 0.01594199, 0.0210447...[]14293.3196090.6226144794.8716321.27634637.6473463.4607269.596265-0.9766820.916942-1.0000000.064439
91UUeqV2(OMat)[8.401, 8.390974320000002, 8.38094864, 8.37092...[-12.306029319763184, -12.309735298156738, -12...[0.00250636, -0.00677688, -0.01450382, -0.0195...[]9308.4641121.0416905374.0029142.50315836.5939653.5144349.661410-0.8538550.856809-1.0000000.009604
92NpNpeqV2(OMat)[8.741999999999999, 8.7319829, 8.72196582, 8.7...[-16.419757843017578, -16.415634155273438, -16...[0.00010047, 0.00343876, 0.00583172, 0.0066036...[]13366.7007012.48889158145.7486373.15949268.3128516.84689614.868774-0.9708150.783776-1.000000-0.092599
93PuPueqV2(OMat)[8.710999999999999, 8.70097432, 8.690948639999...[-21.575969696044922, -21.568323135375977, -21...[0.00021465, -0.018026, -0.02833581, -0.022387...[]25404.45334920.66289385195.92725614.39999478.1721955.57581015.614091-0.6611780.348212-0.0023030.654905
94AmAmeqV2(OMat)[8.773, 8.7629818, 8.75296358, 8.7429453800000...[8.622910499572754, 8.642560958862305, 8.69469...[-0.00028193, -0.00328918, -0.00321345, 0.0024...[]863.5712660.9647315850.9505552.22747730.7675442.9255383.732556-0.9994400.872640-0.9951980.738493
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95 rows × 19 columns

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[] 2 \n", - "1 [-1.365e-05, -4.945e-05, -8.538e-05, -0.000155... [] 2 \n", - "2 [-3.34e-05, 0.00016922, 0.00028867, 0.0005224,... [] 1 \n", - "3 [-4.817e-05, 0.00051783, 0.00090912, 0.0012907... [] 1 \n", - "4 [-7.486e-05, -0.00062429, -0.00124062, -0.0016... [] 1 \n", - ".. ... .. ... \n", - "90 [0.00149543, 0.00933722, 0.01594199, 0.0210447... [] 14 \n", - "91 [0.00250636, -0.00677688, -0.01450382, -0.0195... [] 9 \n", - "92 [0.00010047, 0.00343876, 0.00583172, 0.0066036... [] 13 \n", - "93 [0.00021465, -0.018026, -0.02833581, -0.022387... [] 25 \n", - "94 [-0.00028193, -0.00328918, -0.00321345, 0.0024... [] 8 \n", - "\n", - " force-total-variation force-jump energy-diff-flip-times \\\n", - "0 106.606564 1.924082 17 \n", - "1 265.816823 5.186691 14 \n", - "2 28.116090 0.053238 31 \n", - "3 188.239996 0.177490 35 \n", - "4 142.788128 0.010691 19 \n", - ".. ... ... ... \n", - "90 293.319609 0.622614 47 \n", - "91 308.464112 1.041690 53 \n", - "92 366.700701 2.488891 58 \n", - "93 404.453349 20.662893 85 \n", - "94 63.571266 0.964731 58 \n", - "\n", - " energy-grad-norm-max energy-jump energy-total-variation tortuosity \\\n", - "0 93.241588 0.564488 18.840863 1.555587 \n", - "1 77.250589 0.699341 19.451416 4.166659 \n", - "2 17.085735 0.181582 7.866485 1.334280 \n", - "3 22.672879 0.328797 13.735467 1.275790 \n", - "4 30.771105 0.572540 13.649937 1.145869 \n", - ".. ... ... ... ... \n", - "90 94.871632 1.276346 37.647346 3.460726 \n", - "91 74.002914 2.503158 36.593965 3.514434 \n", - "92 145.748637 3.159492 68.312851 6.846896 \n", - "93 195.927256 14.399994 78.172195 5.575810 \n", - "94 50.950555 2.227477 30.767544 2.925538 \n", - "\n", - " conservation-deviation spearman-descending-force \\\n", - "0 2.842868 -0.994359 \n", - "1 10.740978 -0.973671 \n", - "2 1.063989 -0.998354 \n", - "3 6.498375 -0.997688 \n", - "4 4.867476 -1.000000 \n", - ".. ... ... \n", - "90 9.596265 -0.976682 \n", - "91 9.661410 -0.853855 \n", - "92 14.868774 -0.970815 \n", - "93 15.614091 -0.661178 \n", - "94 3.732556 -0.999440 \n", - "\n", - " spearman-ascending-force spearman-repulsion-energy \\\n", - "0 -0.072700 -0.992857 \n", - "1 -0.546770 -0.912122 \n", - "2 0.976426 -0.981398 \n", - "3 0.983071 -0.972891 \n", - "4 0.990445 -0.984379 \n", - ".. ... ... \n", - "90 0.916942 -1.000000 \n", - "91 0.856809 -1.000000 \n", - "92 0.783776 -1.000000 \n", - "93 0.348212 -0.002303 \n", - "94 0.872640 -0.995198 \n", - "\n", - " spearman-attraction-energy \n", - "0 0.431210 \n", - "1 0.600920 \n", - "2 0.705693 \n", - "3 0.014737 \n", - "4 0.993144 \n", - ".. ... \n", - "90 0.064439 \n", - "91 0.009604 \n", - "92 -0.092599 \n", - "93 0.654905 \n", - 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