Upload folder using huggingface_hub

.gitattributes

@@ -37,3 +37,4 @@ PDF/Anticiper-les-effets-de-l-adaptation-dun-rechauffement-climatique-de-plus-4-
 PDF/deu-2023.pdf filter=lfs diff=lfs merge=lfs -text
 PDF/memo_risques_physiques_focus_batiment_2022.pdf filter=lfs diff=lfs merge=lfs -text
 vectors/index.annoy filter=lfs diff=lfs merge=lfs -text
+clara_env/bin/ruff filter=lfs diff=lfs merge=lfs -text

.python-version

@@ -0,0 +1 @@
+3.10.8

README.md

@@ -1,12 +1,23 @@
 ---
-title: Clara
-emoji: 📈
-colorFrom: green
+title: clara
+app_file: app.py
+sdk: gradio
+sdk_version: 4.19.1
+---
+# CLARA
+
+
+---
+title: ClimateQ&A
+emoji: 🌍
+colorFrom: blue
 colorTo: red
 sdk: gradio
-sdk_version: 4.32.0
+sdk_version: 4.19.1
 app_file: app.py
+fullWidth: true
 pinned: false
+short_description: Ask any questions to the IPCC and IPBES reports
 ---
 
-Check out the configuration reference at https://huggingface.co/docs/hub/spaces-config-reference
+To run locally run ``gradio app.py`` 

clara_env/bin/Activate.ps1

@@ -0,0 +1,247 @@
+<#
+.Synopsis
+Activate a Python virtual environment for the current PowerShell session.
+
+.Description
+Pushes the python executable for a virtual environment to the front of the
+$Env:PATH environment variable and sets the prompt to signify that you are
+in a Python virtual environment. Makes use of the command line switches as
+well as the `pyvenv.cfg` file values present in the virtual environment.
+
+.Parameter VenvDir
+Path to the directory that contains the virtual environment to activate. The
+default value for this is the parent of the directory that the Activate.ps1
+script is located within.
+
+.Parameter Prompt
+The prompt prefix to display when this virtual environment is activated. By
+default, this prompt is the name of the virtual environment folder (VenvDir)
+surrounded by parentheses and followed by a single space (ie. '(.venv) ').
+
+.Example
+Activate.ps1
+Activates the Python virtual environment that contains the Activate.ps1 script.
+
+.Example
+Activate.ps1 -Verbose
+Activates the Python virtual environment that contains the Activate.ps1 script,
+and shows extra information about the activation as it executes.
+
+.Example
+Activate.ps1 -VenvDir C:\Users\MyUser\Common\.venv
+Activates the Python virtual environment located in the specified location.
+
+.Example
+Activate.ps1 -Prompt "MyPython"
+Activates the Python virtual environment that contains the Activate.ps1 script,
+and prefixes the current prompt with the specified string (surrounded in
+parentheses) while the virtual environment is active.
+
+.Notes
+On Windows, it may be required to enable this Activate.ps1 script by setting the
+execution policy for the user. You can do this by issuing the following PowerShell
+command:
+
+PS C:\> Set-ExecutionPolicy -ExecutionPolicy RemoteSigned -Scope CurrentUser
+
+For more information on Execution Policies: 
+https://go.microsoft.com/fwlink/?LinkID=135170
+
+#>
+Param(
+    [Parameter(Mandatory = $false)]
+    [String]
+    $VenvDir,
+    [Parameter(Mandatory = $false)]
+    [String]
+    $Prompt
+)
+
+<# Function declarations --------------------------------------------------- #>
+
+<#
+.Synopsis
+Remove all shell session elements added by the Activate script, including the
+addition of the virtual environment's Python executable from the beginning of
+the PATH variable.
+
+.Parameter NonDestructive
+If present, do not remove this function from the global namespace for the
+session.
+
+#>
+function global:deactivate ([switch]$NonDestructive) {
+    # Revert to original values
+
+    # The prior prompt:
+    if (Test-Path -Path Function:_OLD_VIRTUAL_PROMPT) {
+        Copy-Item -Path Function:_OLD_VIRTUAL_PROMPT -Destination Function:prompt
+        Remove-Item -Path Function:_OLD_VIRTUAL_PROMPT
+    }
+
+    # The prior PYTHONHOME:
+    if (Test-Path -Path Env:_OLD_VIRTUAL_PYTHONHOME) {
+        Copy-Item -Path Env:_OLD_VIRTUAL_PYTHONHOME -Destination Env:PYTHONHOME
+        Remove-Item -Path Env:_OLD_VIRTUAL_PYTHONHOME
+    }
+
+    # The prior PATH:
+    if (Test-Path -Path Env:_OLD_VIRTUAL_PATH) {
+        Copy-Item -Path Env:_OLD_VIRTUAL_PATH -Destination Env:PATH
+        Remove-Item -Path Env:_OLD_VIRTUAL_PATH
+    }
+
+    # Just remove the VIRTUAL_ENV altogether:
+    if (Test-Path -Path Env:VIRTUAL_ENV) {
+        Remove-Item -Path env:VIRTUAL_ENV
+    }
+
+    # Just remove VIRTUAL_ENV_PROMPT altogether.
+    if (Test-Path -Path Env:VIRTUAL_ENV_PROMPT) {
+        Remove-Item -Path env:VIRTUAL_ENV_PROMPT
+    }
+
+    # Just remove the _PYTHON_VENV_PROMPT_PREFIX altogether:
+    if (Get-Variable -Name "_PYTHON_VENV_PROMPT_PREFIX" -ErrorAction SilentlyContinue) {
+        Remove-Variable -Name _PYTHON_VENV_PROMPT_PREFIX -Scope Global -Force
+    }
+
+    # Leave deactivate function in the global namespace if requested:
+    if (-not $NonDestructive) {
+        Remove-Item -Path function:deactivate
+    }
+}
+
+<#
+.Description
+Get-PyVenvConfig parses the values from the pyvenv.cfg file located in the
+given folder, and returns them in a map.
+
+For each line in the pyvenv.cfg file, if that line can be parsed into exactly
+two strings separated by `=` (with any amount of whitespace surrounding the =)
+then it is considered a `key = value` line. The left hand string is the key,
+the right hand is the value.
+
+If the value starts with a `'` or a `"` then the first and last character is
+stripped from the value before being captured.
+
+.Parameter ConfigDir
+Path to the directory that contains the `pyvenv.cfg` file.
+#>
+function Get-PyVenvConfig(
+    [String]
+    $ConfigDir
+) {
+    Write-Verbose "Given ConfigDir=$ConfigDir, obtain values in pyvenv.cfg"
+
+    # Ensure the file exists, and issue a warning if it doesn't (but still allow the function to continue).
+    $pyvenvConfigPath = Join-Path -Resolve -Path $ConfigDir -ChildPath 'pyvenv.cfg' -ErrorAction Continue
+
+    # An empty map will be returned if no config file is found.
+    $pyvenvConfig = @{ }
+
+    if ($pyvenvConfigPath) {
+
+        Write-Verbose "File exists, parse `key = value` lines"
+        $pyvenvConfigContent = Get-Content -Path $pyvenvConfigPath
+
+        $pyvenvConfigContent | ForEach-Object {
+            $keyval = $PSItem -split "\s*=\s*", 2
+            if ($keyval[0] -and $keyval[1]) {
+                $val = $keyval[1]
+
+                # Remove extraneous quotations around a string value.
+                if ("'""".Contains($val.Substring(0, 1))) {
+                    $val = $val.Substring(1, $val.Length - 2)
+                }
+
+                $pyvenvConfig[$keyval[0]] = $val
+                Write-Verbose "Adding Key: '$($keyval[0])'='$val'"
+            }
+        }
+    }
+    return $pyvenvConfig
+}
+
+
+<# Begin Activate script --------------------------------------------------- #>
+
+# Determine the containing directory of this script
+$VenvExecPath = Split-Path -Parent $MyInvocation.MyCommand.Definition
+$VenvExecDir = Get-Item -Path $VenvExecPath
+
+Write-Verbose "Activation script is located in path: '$VenvExecPath'"
+Write-Verbose "VenvExecDir Fullname: '$($VenvExecDir.FullName)"
+Write-Verbose "VenvExecDir Name: '$($VenvExecDir.Name)"
+
+# Set values required in priority: CmdLine, ConfigFile, Default
+# First, get the location of the virtual environment, it might not be
+# VenvExecDir if specified on the command line.
+if ($VenvDir) {
+    Write-Verbose "VenvDir given as parameter, using '$VenvDir' to determine values"
+}
+else {
+    Write-Verbose "VenvDir not given as a parameter, using parent directory name as VenvDir."
+    $VenvDir = $VenvExecDir.Parent.FullName.TrimEnd("\\/")
+    Write-Verbose "VenvDir=$VenvDir"
+}
+
+# Next, read the `pyvenv.cfg` file to determine any required value such
+# as `prompt`.
+$pyvenvCfg = Get-PyVenvConfig -ConfigDir $VenvDir
+
+# Next, set the prompt from the command line, or the config file, or
+# just use the name of the virtual environment folder.
+if ($Prompt) {
+    Write-Verbose "Prompt specified as argument, using '$Prompt'"
+}
+else {
+    Write-Verbose "Prompt not specified as argument to script, checking pyvenv.cfg value"
+    if ($pyvenvCfg -and $pyvenvCfg['prompt']) {
+        Write-Verbose "  Setting based on value in pyvenv.cfg='$($pyvenvCfg['prompt'])'"
+        $Prompt = $pyvenvCfg['prompt'];
+    }
+    else {
+        Write-Verbose "  Setting prompt based on parent's directory's name. (Is the directory name passed to venv module when creating the virtual environment)"
+        Write-Verbose "  Got leaf-name of $VenvDir='$(Split-Path -Path $venvDir -Leaf)'"
+        $Prompt = Split-Path -Path $venvDir -Leaf
+    }
+}
+
+Write-Verbose "Prompt = '$Prompt'"
+Write-Verbose "VenvDir='$VenvDir'"
+
+# Deactivate any currently active virtual environment, but leave the
+# deactivate function in place.
+deactivate -nondestructive
+
+# Now set the environment variable VIRTUAL_ENV, used by many tools to determine
+# that there is an activated venv.
+$env:VIRTUAL_ENV = $VenvDir
+
+if (-not $Env:VIRTUAL_ENV_DISABLE_PROMPT) {
+
+    Write-Verbose "Setting prompt to '$Prompt'"
+
+    # Set the prompt to include the env name
+    # Make sure _OLD_VIRTUAL_PROMPT is global
+    function global:_OLD_VIRTUAL_PROMPT { "" }
+    Copy-Item -Path function:prompt -Destination function:_OLD_VIRTUAL_PROMPT
+    New-Variable -Name _PYTHON_VENV_PROMPT_PREFIX -Description "Python virtual environment prompt prefix" -Scope Global -Option ReadOnly -Visibility Public -Value $Prompt
+
+    function global:prompt {
+        Write-Host -NoNewline -ForegroundColor Green "($_PYTHON_VENV_PROMPT_PREFIX) "
+        _OLD_VIRTUAL_PROMPT
+    }
+    $env:VIRTUAL_ENV_PROMPT = $Prompt
+}
+
+# Clear PYTHONHOME
+if (Test-Path -Path Env:PYTHONHOME) {
+    Copy-Item -Path Env:PYTHONHOME -Destination Env:_OLD_VIRTUAL_PYTHONHOME
+    Remove-Item -Path Env:PYTHONHOME
+}
+
+# Add the venv to the PATH
+Copy-Item -Path Env:PATH -Destination Env:_OLD_VIRTUAL_PATH
+$Env:PATH = "$VenvExecDir$([System.IO.Path]::PathSeparator)$Env:PATH"

clara_env/bin/activate

@@ -0,0 +1,69 @@
+# This file must be used with "source bin/activate" *from bash*
+# you cannot run it directly
+
+deactivate () {
+    # reset old environment variables
+    if [ -n "${_OLD_VIRTUAL_PATH:-}" ] ; then
+        PATH="${_OLD_VIRTUAL_PATH:-}"
+        export PATH
+        unset _OLD_VIRTUAL_PATH
+    fi
+    if [ -n "${_OLD_VIRTUAL_PYTHONHOME:-}" ] ; then
+        PYTHONHOME="${_OLD_VIRTUAL_PYTHONHOME:-}"
+        export PYTHONHOME
+        unset _OLD_VIRTUAL_PYTHONHOME
+    fi
+
+    # This should detect bash and zsh, which have a hash command that must
+    # be called to get it to forget past commands.  Without forgetting
+    # past commands the $PATH changes we made may not be respected
+    if [ -n "${BASH:-}" -o -n "${ZSH_VERSION:-}" ] ; then
+        hash -r 2> /dev/null
+    fi
+
+    if [ -n "${_OLD_VIRTUAL_PS1:-}" ] ; then
+        PS1="${_OLD_VIRTUAL_PS1:-}"
+        export PS1
+        unset _OLD_VIRTUAL_PS1
+    fi
+
+    unset VIRTUAL_ENV
+    unset VIRTUAL_ENV_PROMPT
+    if [ ! "${1:-}" = "nondestructive" ] ; then
+    # Self destruct!
+        unset -f deactivate
+    fi
+}
+
+# unset irrelevant variables
+deactivate nondestructive
+
+VIRTUAL_ENV="/Users/lucas.s/Dev/clara/clara_env"
+export VIRTUAL_ENV
+
+_OLD_VIRTUAL_PATH="$PATH"
+PATH="$VIRTUAL_ENV/bin:$PATH"
+export PATH
+
+# unset PYTHONHOME if set
+# this will fail if PYTHONHOME is set to the empty string (which is bad anyway)
+# could use `if (set -u; : $PYTHONHOME) ;` in bash
+if [ -n "${PYTHONHOME:-}" ] ; then
+    _OLD_VIRTUAL_PYTHONHOME="${PYTHONHOME:-}"
+    unset PYTHONHOME
+fi
+
+if [ -z "${VIRTUAL_ENV_DISABLE_PROMPT:-}" ] ; then
+    _OLD_VIRTUAL_PS1="${PS1:-}"
+    PS1="(clara_env) ${PS1:-}"
+    export PS1
+    VIRTUAL_ENV_PROMPT="(clara_env) "
+    export VIRTUAL_ENV_PROMPT
+fi
+
+# This should detect bash and zsh, which have a hash command that must
+# be called to get it to forget past commands.  Without forgetting
+# past commands the $PATH changes we made may not be respected
+if [ -n "${BASH:-}" -o -n "${ZSH_VERSION:-}" ] ; then
+    hash -r 2> /dev/null
+fi

clara_env/bin/activate.csh

@@ -0,0 +1,26 @@
+# This file must be used with "source bin/activate.csh" *from csh*.
+# You cannot run it directly.
+# Created by Davide Di Blasi <davidedb@gmail.com>.
+# Ported to Python 3.3 venv by Andrew Svetlov <andrew.svetlov@gmail.com>
+
+alias deactivate 'test $?_OLD_VIRTUAL_PATH != 0 && setenv PATH "$_OLD_VIRTUAL_PATH" && unset _OLD_VIRTUAL_PATH; rehash; test $?_OLD_VIRTUAL_PROMPT != 0 && set prompt="$_OLD_VIRTUAL_PROMPT" && unset _OLD_VIRTUAL_PROMPT; unsetenv VIRTUAL_ENV; unsetenv VIRTUAL_ENV_PROMPT; test "\!:*" != "nondestructive" && unalias deactivate'
+
+# Unset irrelevant variables.
+deactivate nondestructive
+
+setenv VIRTUAL_ENV "/Users/lucas.s/Dev/clara/clara_env"
+
+set _OLD_VIRTUAL_PATH="$PATH"
+setenv PATH "$VIRTUAL_ENV/bin:$PATH"
+
+
+set _OLD_VIRTUAL_PROMPT="$prompt"
+
+if (! "$?VIRTUAL_ENV_DISABLE_PROMPT") then
+    set prompt = "(clara_env) $prompt"
+    setenv VIRTUAL_ENV_PROMPT "(clara_env) "
+endif
+
+alias pydoc python -m pydoc
+
+rehash

clara_env/bin/activate.fish

@@ -0,0 +1,66 @@
+# This file must be used with "source <venv>/bin/activate.fish" *from fish*
+# (https://fishshell.com/); you cannot run it directly.
+
+function deactivate  -d "Exit virtual environment and return to normal shell environment"
+    # reset old environment variables
+    if test -n "$_OLD_VIRTUAL_PATH"
+        set -gx PATH $_OLD_VIRTUAL_PATH
+        set -e _OLD_VIRTUAL_PATH
+    end
+    if test -n "$_OLD_VIRTUAL_PYTHONHOME"
+        set -gx PYTHONHOME $_OLD_VIRTUAL_PYTHONHOME
+        set -e _OLD_VIRTUAL_PYTHONHOME
+    end
+
+    if test -n "$_OLD_FISH_PROMPT_OVERRIDE"
+        functions -e fish_prompt
+        set -e _OLD_FISH_PROMPT_OVERRIDE
+        functions -c _old_fish_prompt fish_prompt
+        functions -e _old_fish_prompt
+    end
+
+    set -e VIRTUAL_ENV
+    set -e VIRTUAL_ENV_PROMPT
+    if test "$argv[1]" != "nondestructive"
+        # Self-destruct!
+        functions -e deactivate
+    end
+end
+
+# Unset irrelevant variables.
+deactivate nondestructive
+
+set -gx VIRTUAL_ENV "/Users/lucas.s/Dev/clara/clara_env"
+
+set -gx _OLD_VIRTUAL_PATH $PATH
+set -gx PATH "$VIRTUAL_ENV/bin" $PATH
+
+# Unset PYTHONHOME if set.
+if set -q PYTHONHOME
+    set -gx _OLD_VIRTUAL_PYTHONHOME $PYTHONHOME
+    set -e PYTHONHOME
+end
+
+if test -z "$VIRTUAL_ENV_DISABLE_PROMPT"
+    # fish uses a function instead of an env var to generate the prompt.
+
+    # Save the current fish_prompt function as the function _old_fish_prompt.
+    functions -c fish_prompt _old_fish_prompt
+
+    # With the original prompt function renamed, we can override with our own.
+    function fish_prompt
+        # Save the return status of the last command.
+        set -l old_status $status
+
+        # Output the venv prompt; color taken from the blue of the Python logo.
+        printf "%s%s%s" (set_color 4B8BBE) "(clara_env) " (set_color normal)
+
+        # Restore the return status of the previous command.
+        echo "exit $old_status" | .
+        # Output the original/"old" prompt.
+        _old_fish_prompt
+    end
+
+    set -gx _OLD_FISH_PROMPT_OVERRIDE "$VIRTUAL_ENV"
+    set -gx VIRTUAL_ENV_PROMPT "(clara_env) "
+end

clara_env/bin/convert-caffe2-to-onnx

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from caffe2.python.onnx.bin.conversion import caffe2_to_onnx
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(caffe2_to_onnx())

clara_env/bin/convert-onnx-to-caffe2

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from caffe2.python.onnx.bin.conversion import onnx_to_caffe2
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(onnx_to_caffe2())

clara_env/bin/distro

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from distro.distro import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/dotenv

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from dotenv.__main__ import cli
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(cli())

clara_env/bin/dumppdf.py

@@ -0,0 +1,473 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+"""Extract pdf structure in XML format"""
+import logging
+import os.path
+import re
+import sys
+from typing import Any, Container, Dict, Iterable, List, Optional, TextIO, Union, cast
+from argparse import ArgumentParser
+
+import pdfminer
+from pdfminer.pdfdocument import PDFDocument, PDFNoOutlines, PDFXRefFallback
+from pdfminer.pdfpage import PDFPage
+from pdfminer.pdfparser import PDFParser
+from pdfminer.pdftypes import PDFObjectNotFound, PDFValueError
+from pdfminer.pdftypes import PDFStream, PDFObjRef, resolve1, stream_value
+from pdfminer.psparser import PSKeyword, PSLiteral, LIT
+from pdfminer.utils import isnumber
+
+logging.basicConfig()
+logger = logging.getLogger(__name__)
+
+ESC_PAT = re.compile(r'[\000-\037&<>()"\042\047\134\177-\377]')
+
+
+def escape(s: Union[str, bytes]) -> str:
+    if isinstance(s, bytes):
+        us = str(s, "latin-1")
+    else:
+        us = s
+    return ESC_PAT.sub(lambda m: "&#%d;" % ord(m.group(0)), us)
+
+
+def dumpxml(out: TextIO, obj: object, codec: Optional[str] = None) -> None:
+    if obj is None:
+        out.write("<null />")
+        return
+
+    if isinstance(obj, dict):
+        out.write('<dict size="%d">\n' % len(obj))
+        for (k, v) in obj.items():
+            out.write("<key>%s</key>\n" % k)
+            out.write("<value>")
+            dumpxml(out, v)
+            out.write("</value>\n")
+        out.write("</dict>")
+        return
+
+    if isinstance(obj, list):
+        out.write('<list size="%d">\n' % len(obj))
+        for v in obj:
+            dumpxml(out, v)
+            out.write("\n")
+        out.write("</list>")
+        return
+
+    if isinstance(obj, (str, bytes)):
+        out.write('<string size="%d">%s</string>' % (len(obj), escape(obj)))
+        return
+
+    if isinstance(obj, PDFStream):
+        if codec == "raw":
+            # Bug: writing bytes to text I/O. This will raise TypeError.
+            out.write(obj.get_rawdata())  # type: ignore [arg-type]
+        elif codec == "binary":
+            # Bug: writing bytes to text I/O. This will raise TypeError.
+            out.write(obj.get_data())  # type: ignore [arg-type]
+        else:
+            out.write("<stream>\n<props>\n")
+            dumpxml(out, obj.attrs)
+            out.write("\n</props>\n")
+            if codec == "text":
+                data = obj.get_data()
+                out.write('<data size="%d">%s</data>\n' % (len(data), escape(data)))
+            out.write("</stream>")
+        return
+
+    if isinstance(obj, PDFObjRef):
+        out.write('<ref id="%d" />' % obj.objid)
+        return
+
+    if isinstance(obj, PSKeyword):
+        # Likely bug: obj.name is bytes, not str
+        out.write("<keyword>%s</keyword>" % obj.name)  # type: ignore [str-bytes-safe]
+        return
+
+    if isinstance(obj, PSLiteral):
+        # Likely bug: obj.name may be bytes, not str
+        out.write("<literal>%s</literal>" % obj.name)  # type: ignore [str-bytes-safe]
+        return
+
+    if isnumber(obj):
+        out.write("<number>%s</number>" % obj)
+        return
+
+    raise TypeError(obj)
+
+
+def dumptrailers(
+    out: TextIO, doc: PDFDocument, show_fallback_xref: bool = False
+) -> None:
+    for xref in doc.xrefs:
+        if not isinstance(xref, PDFXRefFallback) or show_fallback_xref:
+            out.write("<trailer>\n")
+            dumpxml(out, xref.get_trailer())
+            out.write("\n</trailer>\n\n")
+    no_xrefs = all(isinstance(xref, PDFXRefFallback) for xref in doc.xrefs)
+    if no_xrefs and not show_fallback_xref:
+        msg = (
+            "This PDF does not have an xref. Use --show-fallback-xref if "
+            "you want to display the content of a fallback xref that "
+            "contains all objects."
+        )
+        logger.warning(msg)
+    return
+
+
+def dumpallobjs(
+    out: TextIO,
+    doc: PDFDocument,
+    codec: Optional[str] = None,
+    show_fallback_xref: bool = False,
+) -> None:
+    visited = set()
+    out.write("<pdf>")
+    for xref in doc.xrefs:
+        for objid in xref.get_objids():
+            if objid in visited:
+                continue
+            visited.add(objid)
+            try:
+                obj = doc.getobj(objid)
+                if obj is None:
+                    continue
+                out.write('<object id="%d">\n' % objid)
+                dumpxml(out, obj, codec=codec)
+                out.write("\n</object>\n\n")
+            except PDFObjectNotFound as e:
+                print("not found: %r" % e)
+    dumptrailers(out, doc, show_fallback_xref)
+    out.write("</pdf>")
+    return
+
+
+def dumpoutline(
+    outfp: TextIO,
+    fname: str,
+    objids: Any,
+    pagenos: Container[int],
+    password: str = "",
+    dumpall: bool = False,
+    codec: Optional[str] = None,
+    extractdir: Optional[str] = None,
+) -> None:
+    fp = open(fname, "rb")
+    parser = PDFParser(fp)
+    doc = PDFDocument(parser, password)
+    pages = {
+        page.pageid: pageno
+        for (pageno, page) in enumerate(PDFPage.create_pages(doc), 1)
+    }
+
+    def resolve_dest(dest: object) -> Any:
+        if isinstance(dest, (str, bytes)):
+            dest = resolve1(doc.get_dest(dest))
+        elif isinstance(dest, PSLiteral):
+            dest = resolve1(doc.get_dest(dest.name))
+        if isinstance(dest, dict):
+            dest = dest["D"]
+        if isinstance(dest, PDFObjRef):
+            dest = dest.resolve()
+        return dest
+
+    try:
+        outlines = doc.get_outlines()
+        outfp.write("<outlines>\n")
+        for (level, title, dest, a, se) in outlines:
+            pageno = None
+            if dest:
+                dest = resolve_dest(dest)
+                pageno = pages[dest[0].objid]
+            elif a:
+                action = a
+                if isinstance(action, dict):
+                    subtype = action.get("S")
+                    if subtype and repr(subtype) == "/'GoTo'" and action.get("D"):
+                        dest = resolve_dest(action["D"])
+                        pageno = pages[dest[0].objid]
+            s = escape(title)
+            outfp.write('<outline level="{!r}" title="{}">\n'.format(level, s))
+            if dest is not None:
+                outfp.write("<dest>")
+                dumpxml(outfp, dest)
+                outfp.write("</dest>\n")
+            if pageno is not None:
+                outfp.write("<pageno>%r</pageno>\n" % pageno)
+            outfp.write("</outline>\n")
+        outfp.write("</outlines>\n")
+    except PDFNoOutlines:
+        pass
+    parser.close()
+    fp.close()
+    return
+
+
+LITERAL_FILESPEC = LIT("Filespec")
+LITERAL_EMBEDDEDFILE = LIT("EmbeddedFile")
+
+
+def extractembedded(fname: str, password: str, extractdir: str) -> None:
+    def extract1(objid: int, obj: Dict[str, Any]) -> None:
+        filename = os.path.basename(obj.get("UF") or cast(bytes, obj.get("F")).decode())
+        fileref = obj["EF"].get("UF") or obj["EF"].get("F")
+        fileobj = doc.getobj(fileref.objid)
+        if not isinstance(fileobj, PDFStream):
+            error_msg = (
+                "unable to process PDF: reference for %r is not a "
+                "PDFStream" % filename
+            )
+            raise PDFValueError(error_msg)
+        if fileobj.get("Type") is not LITERAL_EMBEDDEDFILE:
+            raise PDFValueError(
+                "unable to process PDF: reference for %r "
+                "is not an EmbeddedFile" % (filename)
+            )
+        path = os.path.join(extractdir, "%.6d-%s" % (objid, filename))
+        if os.path.exists(path):
+            raise IOError("file exists: %r" % path)
+        print("extracting: %r" % path)
+        os.makedirs(os.path.dirname(path), exist_ok=True)
+        out = open(path, "wb")
+        out.write(fileobj.get_data())
+        out.close()
+        return
+
+    with open(fname, "rb") as fp:
+        parser = PDFParser(fp)
+        doc = PDFDocument(parser, password)
+        extracted_objids = set()
+        for xref in doc.xrefs:
+            for objid in xref.get_objids():
+                obj = doc.getobj(objid)
+                if (
+                    objid not in extracted_objids
+                    and isinstance(obj, dict)
+                    and obj.get("Type") is LITERAL_FILESPEC
+                ):
+                    extracted_objids.add(objid)
+                    extract1(objid, obj)
+    return
+
+
+def dumppdf(
+    outfp: TextIO,
+    fname: str,
+    objids: Iterable[int],
+    pagenos: Container[int],
+    password: str = "",
+    dumpall: bool = False,
+    codec: Optional[str] = None,
+    extractdir: Optional[str] = None,
+    show_fallback_xref: bool = False,
+) -> None:
+    fp = open(fname, "rb")
+    parser = PDFParser(fp)
+    doc = PDFDocument(parser, password)
+    if objids:
+        for objid in objids:
+            obj = doc.getobj(objid)
+            dumpxml(outfp, obj, codec=codec)
+    if pagenos:
+        for (pageno, page) in enumerate(PDFPage.create_pages(doc)):
+            if pageno in pagenos:
+                if codec:
+                    for obj in page.contents:
+                        obj = stream_value(obj)
+                        dumpxml(outfp, obj, codec=codec)
+                else:
+                    dumpxml(outfp, page.attrs)
+    if dumpall:
+        dumpallobjs(outfp, doc, codec, show_fallback_xref)
+    if (not objids) and (not pagenos) and (not dumpall):
+        dumptrailers(outfp, doc, show_fallback_xref)
+    fp.close()
+    if codec not in ("raw", "binary"):
+        outfp.write("\n")
+    return
+
+
+def create_parser() -> ArgumentParser:
+    parser = ArgumentParser(description=__doc__, add_help=True)
+    parser.add_argument(
+        "files",
+        type=str,
+        default=None,
+        nargs="+",
+        help="One or more paths to PDF files.",
+    )
+
+    parser.add_argument(
+        "--version",
+        "-v",
+        action="version",
+        version="pdfminer.six v{}".format(pdfminer.__version__),
+    )
+    parser.add_argument(
+        "--debug",
+        "-d",
+        default=False,
+        action="store_true",
+        help="Use debug logging level.",
+    )
+    procedure_parser = parser.add_mutually_exclusive_group()
+    procedure_parser.add_argument(
+        "--extract-toc",
+        "-T",
+        default=False,
+        action="store_true",
+        help="Extract structure of outline",
+    )
+    procedure_parser.add_argument(
+        "--extract-embedded", "-E", type=str, help="Extract embedded files"
+    )
+
+    parse_params = parser.add_argument_group(
+        "Parser", description="Used during PDF parsing"
+    )
+    parse_params.add_argument(
+        "--page-numbers",
+        type=int,
+        default=None,
+        nargs="+",
+        help="A space-seperated list of page numbers to parse.",
+    )
+    parse_params.add_argument(
+        "--pagenos",
+        "-p",
+        type=str,
+        help="A comma-separated list of page numbers to parse. Included for "
+        "legacy applications, use --page-numbers for more idiomatic "
+        "argument entry.",
+    )
+    parse_params.add_argument(
+        "--objects",
+        "-i",
+        type=str,
+        help="Comma separated list of object numbers to extract",
+    )
+    parse_params.add_argument(
+        "--all",
+        "-a",
+        default=False,
+        action="store_true",
+        help="If the structure of all objects should be extracted",
+    )
+    parse_params.add_argument(
+        "--show-fallback-xref",
+        action="store_true",
+        help="Additionally show the fallback xref. Use this if the PDF "
+        "has zero or only invalid xref's. This setting is ignored if "
+        "--extract-toc or --extract-embedded is used.",
+    )
+    parse_params.add_argument(
+        "--password",
+        "-P",
+        type=str,
+        default="",
+        help="The password to use for decrypting PDF file.",
+    )
+
+    output_params = parser.add_argument_group(
+        "Output", description="Used during output generation."
+    )
+    output_params.add_argument(
+        "--outfile",
+        "-o",
+        type=str,
+        default="-",
+        help='Path to file where output is written. Or "-" (default) to '
+        "write to stdout.",
+    )
+    codec_parser = output_params.add_mutually_exclusive_group()
+    codec_parser.add_argument(
+        "--raw-stream",
+        "-r",
+        default=False,
+        action="store_true",
+        help="Write stream objects without encoding",
+    )
+    codec_parser.add_argument(
+        "--binary-stream",
+        "-b",
+        default=False,
+        action="store_true",
+        help="Write stream objects with binary encoding",
+    )
+    codec_parser.add_argument(
+        "--text-stream",
+        "-t",
+        default=False,
+        action="store_true",
+        help="Write stream objects as plain text",
+    )
+
+    return parser
+
+
+def main(argv: Optional[List[str]] = None) -> None:
+    parser = create_parser()
+    args = parser.parse_args(args=argv)
+
+    if args.debug:
+        logging.getLogger().setLevel(logging.DEBUG)
+
+    if args.outfile == "-":
+        outfp = sys.stdout
+    else:
+        outfp = open(args.outfile, "w")
+
+    if args.objects:
+        objids = [int(x) for x in args.objects.split(",")]
+    else:
+        objids = []
+
+    if args.page_numbers:
+        pagenos = {x - 1 for x in args.page_numbers}
+    elif args.pagenos:
+        pagenos = {int(x) - 1 for x in args.pagenos.split(",")}
+    else:
+        pagenos = set()
+
+    password = args.password
+
+    if args.raw_stream:
+        codec: Optional[str] = "raw"
+    elif args.binary_stream:
+        codec = "binary"
+    elif args.text_stream:
+        codec = "text"
+    else:
+        codec = None
+
+    for fname in args.files:
+        if args.extract_toc:
+            dumpoutline(
+                outfp,
+                fname,
+                objids,
+                pagenos,
+                password=password,
+                dumpall=args.all,
+                codec=codec,
+                extractdir=None,
+            )
+        elif args.extract_embedded:
+            extractembedded(fname, password=password, extractdir=args.extract_embedded)
+        else:
+            dumppdf(
+                outfp,
+                fname,
+                objids,
+                pagenos,
+                password=password,
+                dumpall=args.all,
+                codec=codec,
+                extractdir=None,
+                show_fallback_xref=args.show_fallback_xref,
+            )
+
+    outfp.close()
+
+
+if __name__ == "__main__":
+    main()

clara_env/bin/email_validator

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from email_validator.__main__ import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/f2py

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from numpy.f2py.f2py2e import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/fastapi

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from fastapi_cli.cli import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/fonttools

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from fontTools.__main__ import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/gradio

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from gradio.cli import cli
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(cli())

clara_env/bin/httpx

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from httpx import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/huggingface-cli

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from huggingface_hub.commands.huggingface_cli import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/ipython

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from IPython import start_ipython
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(start_ipython())

clara_env/bin/ipython3

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from IPython import start_ipython
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(start_ipython())

clara_env/bin/isympy

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from isympy import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/jsondiff

@@ -0,0 +1,41 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+
+from __future__ import print_function
+
+import sys
+import json
+import jsonpatch
+import argparse
+
+
+parser = argparse.ArgumentParser(description='Diff two JSON files')
+parser.add_argument('FILE1', type=argparse.FileType('r'))
+parser.add_argument('FILE2', type=argparse.FileType('r'))
+parser.add_argument('--indent', type=int, default=None,
+                    help='Indent output by n spaces')
+parser.add_argument('-u', '--preserve-unicode', action='store_true',
+                    help='Output Unicode character as-is without using Code Point')
+parser.add_argument('-v', '--version', action='version',
+                    version='%(prog)s ' + jsonpatch.__version__)
+
+
+def main():
+    try:
+        diff_files()
+    except KeyboardInterrupt:
+        sys.exit(1)
+
+
+def diff_files():
+    """ Diffs two JSON files and prints a patch """
+    args = parser.parse_args()
+    doc1 = json.load(args.FILE1)
+    doc2 = json.load(args.FILE2)
+    patch = jsonpatch.make_patch(doc1, doc2)
+    if patch.patch:
+        print(json.dumps(patch.patch, indent=args.indent, ensure_ascii=not(args.preserve_unicode)))
+        sys.exit(1)
+
+if __name__ == "__main__":
+    main()

clara_env/bin/jsonpatch

@@ -0,0 +1,107 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+
+import sys
+import os.path
+import json
+import jsonpatch
+import tempfile
+import argparse
+
+
+parser = argparse.ArgumentParser(
+    description='Apply a JSON patch on a JSON file')
+parser.add_argument('ORIGINAL', type=argparse.FileType('r'),
+                    help='Original file')
+parser.add_argument('PATCH', type=argparse.FileType('r'),
+                    nargs='?', default=sys.stdin,
+                    help='Patch file (read from stdin if omitted)')
+parser.add_argument('--indent', type=int, default=None,
+                    help='Indent output by n spaces')
+parser.add_argument('-b', '--backup', action='store_true',
+                    help='Back up ORIGINAL if modifying in-place')
+parser.add_argument('-i', '--in-place', action='store_true',
+                    help='Modify ORIGINAL in-place instead of to stdout')
+parser.add_argument('-v', '--version', action='version',
+                    version='%(prog)s ' + jsonpatch.__version__)
+parser.add_argument('-u', '--preserve-unicode', action='store_true',
+                    help='Output Unicode character as-is without using Code Point')
+
+def main():
+    try:
+        patch_files()
+    except KeyboardInterrupt:
+        sys.exit(1)
+
+
+def patch_files():
+    """ Diffs two JSON files and prints a patch """
+    args = parser.parse_args()
+    doc = json.load(args.ORIGINAL)
+    patch = json.load(args.PATCH)
+    result = jsonpatch.apply_patch(doc, patch)
+
+    if args.in_place:
+        dirname = os.path.abspath(os.path.dirname(args.ORIGINAL.name))
+
+        try:
+            # Attempt to replace the file atomically.  We do this by
+            # creating a temporary file in the same directory as the
+            # original file so we can atomically move the new file over
+            # the original later.  (This is done in the same directory
+	    # because atomic renames do not work across mount points.)
+
+            fd, pathname = tempfile.mkstemp(dir=dirname)
+            fp = os.fdopen(fd, 'w')
+            atomic = True
+
+        except OSError:
+            # We failed to create the temporary file for an atomic
+            # replace, so fall back to non-atomic mode by backing up
+            # the original (if desired) and writing a new file.
+
+            if args.backup:
+                os.rename(args.ORIGINAL.name, args.ORIGINAL.name + '.orig')
+            fp = open(args.ORIGINAL.name, 'w')
+            atomic = False
+
+    else:
+        # Since we're not replacing the original file in-place, write
+        # the modified JSON to stdout instead.
+
+        fp = sys.stdout
+
+    # By this point we have some sort of file object we can write the 
+    # modified JSON to.
+    
+    json.dump(result, fp, indent=args.indent, ensure_ascii=not(args.preserve_unicode))
+    fp.write('\n')
+
+    if args.in_place:
+        # Close the new file.  If we aren't replacing atomically, this
+        # is our last step, since everything else is already in place.
+
+        fp.close()
+
+        if atomic:
+            try:
+                # Complete the atomic replace by linking the original
+                # to a backup (if desired), fixing up the permissions
+                # on the temporary file, and moving it into place.
+
+                if args.backup:
+                    os.link(args.ORIGINAL.name, args.ORIGINAL.name + '.orig')
+                os.chmod(pathname, os.stat(args.ORIGINAL.name).st_mode)
+                os.rename(pathname, args.ORIGINAL.name)
+
+            except OSError:
+                # In the event we could not actually do the atomic
+                # replace, unlink the original to move it out of the
+                # way and finally move the temporary file into place.
+                
+                os.unlink(args.ORIGINAL.name)
+                os.rename(pathname, args.ORIGINAL.name)
+
+
+if __name__ == "__main__":
+    main()

clara_env/bin/jsonpointer

@@ -0,0 +1,69 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+
+from __future__ import print_function
+
+import sys
+import os.path
+import json
+import jsonpointer
+import argparse
+
+
+parser = argparse.ArgumentParser(
+    description='Resolve a JSON pointer on JSON files')
+
+# Accept pointer as argument or as file
+ptr_group = parser.add_mutually_exclusive_group(required=True)
+
+ptr_group.add_argument('-f', '--pointer-file', type=argparse.FileType('r'),
+                       nargs='?',
+                       help='File containing a JSON pointer expression')
+
+ptr_group.add_argument('POINTER',  type=str, nargs='?',
+                       help='A JSON pointer expression')
+
+parser.add_argument('FILE', type=argparse.FileType('r'), nargs='+',
+                    help='Files for which the pointer should be resolved')
+parser.add_argument('--indent', type=int, default=None,
+                    help='Indent output by n spaces')
+parser.add_argument('-v', '--version', action='version',
+                    version='%(prog)s ' + jsonpointer.__version__)
+
+
+def main():
+    try:
+        resolve_files()
+    except KeyboardInterrupt:
+        sys.exit(1)
+
+
+def parse_pointer(args):
+    if args.POINTER:
+        ptr = args.POINTER
+    elif args.pointer_file:
+        ptr = args.pointer_file.read().strip()
+    else:
+        parser.print_usage()
+        sys.exit(1)
+
+    return ptr
+
+
+def resolve_files():
+    """ Resolve a JSON pointer on JSON files """
+    args = parser.parse_args()
+
+    ptr = parse_pointer(args)
+
+    for f in args.FILE:
+        doc = json.load(f)
+        try:
+            result = jsonpointer.resolve_pointer(doc, ptr)
+            print(json.dumps(result, indent=args.indent))
+        except jsonpointer.JsonPointerException as e:
+            print('Could not resolve pointer: %s' % str(e), file=sys.stderr)
+
+
+if __name__ == "__main__":
+    main()

clara_env/bin/jsonschema

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from jsonschema.cli import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/langchain-server

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from langchain.server import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/langsmith

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from langsmith.cli.main import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/markdown-it

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from markdown_it.cli.parse import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/normalizer

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from charset_normalizer.cli import cli_detect
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(cli_detect())

clara_env/bin/openai

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from openai.cli import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/pdf2txt.py

@@ -0,0 +1,317 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+"""A command line tool for extracting text and images from PDF and
+output it to plain text, html, xml or tags."""
+import argparse
+import logging
+import sys
+from typing import Any, Container, Iterable, List, Optional
+
+import pdfminer.high_level
+from pdfminer.layout import LAParams
+from pdfminer.utils import AnyIO
+
+logging.basicConfig()
+
+OUTPUT_TYPES = ((".htm", "html"), (".html", "html"), (".xml", "xml"), (".tag", "tag"))
+
+
+def float_or_disabled(x: str) -> Optional[float]:
+    if x.lower().strip() == "disabled":
+        return None
+    try:
+        return float(x)
+    except ValueError:
+        raise argparse.ArgumentTypeError("invalid float value: {}".format(x))
+
+
+def extract_text(
+    files: Iterable[str] = [],
+    outfile: str = "-",
+    laparams: Optional[LAParams] = None,
+    output_type: str = "text",
+    codec: str = "utf-8",
+    strip_control: bool = False,
+    maxpages: int = 0,
+    page_numbers: Optional[Container[int]] = None,
+    password: str = "",
+    scale: float = 1.0,
+    rotation: int = 0,
+    layoutmode: str = "normal",
+    output_dir: Optional[str] = None,
+    debug: bool = False,
+    disable_caching: bool = False,
+    **kwargs: Any
+) -> AnyIO:
+    if not files:
+        raise ValueError("Must provide files to work upon!")
+
+    if output_type == "text" and outfile != "-":
+        for override, alttype in OUTPUT_TYPES:
+            if outfile.endswith(override):
+                output_type = alttype
+
+    if outfile == "-":
+        outfp: AnyIO = sys.stdout
+        if sys.stdout.encoding is not None:
+            codec = "utf-8"
+    else:
+        outfp = open(outfile, "wb")
+
+    for fname in files:
+        with open(fname, "rb") as fp:
+            pdfminer.high_level.extract_text_to_fp(fp, **locals())
+    return outfp
+
+
+def create_parser() -> argparse.ArgumentParser:
+    parser = argparse.ArgumentParser(description=__doc__, add_help=True)
+    parser.add_argument(
+        "files",
+        type=str,
+        default=None,
+        nargs="+",
+        help="One or more paths to PDF files.",
+    )
+
+    parser.add_argument(
+        "--version",
+        "-v",
+        action="version",
+        version="pdfminer.six v{}".format(pdfminer.__version__),
+    )
+    parser.add_argument(
+        "--debug",
+        "-d",
+        default=False,
+        action="store_true",
+        help="Use debug logging level.",
+    )
+    parser.add_argument(
+        "--disable-caching",
+        "-C",
+        default=False,
+        action="store_true",
+        help="If caching or resources, such as fonts, should be disabled.",
+    )
+
+    parse_params = parser.add_argument_group(
+        "Parser", description="Used during PDF parsing"
+    )
+    parse_params.add_argument(
+        "--page-numbers",
+        type=int,
+        default=None,
+        nargs="+",
+        help="A space-seperated list of page numbers to parse.",
+    )
+    parse_params.add_argument(
+        "--pagenos",
+        "-p",
+        type=str,
+        help="A comma-separated list of page numbers to parse. "
+        "Included for legacy applications, use --page-numbers "
+        "for more idiomatic argument entry.",
+    )
+    parse_params.add_argument(
+        "--maxpages",
+        "-m",
+        type=int,
+        default=0,
+        help="The maximum number of pages to parse.",
+    )
+    parse_params.add_argument(
+        "--password",
+        "-P",
+        type=str,
+        default="",
+        help="The password to use for decrypting PDF file.",
+    )
+    parse_params.add_argument(
+        "--rotation",
+        "-R",
+        default=0,
+        type=int,
+        help="The number of degrees to rotate the PDF "
+        "before other types of processing.",
+    )
+
+    la_params = LAParams()  # will be used for defaults
+    la_param_group = parser.add_argument_group(
+        "Layout analysis", description="Used during layout analysis."
+    )
+    la_param_group.add_argument(
+        "--no-laparams",
+        "-n",
+        default=False,
+        action="store_true",
+        help="If layout analysis parameters should be ignored.",
+    )
+    la_param_group.add_argument(
+        "--detect-vertical",
+        "-V",
+        default=la_params.detect_vertical,
+        action="store_true",
+        help="If vertical text should be considered during layout analysis",
+    )
+    la_param_group.add_argument(
+        "--line-overlap",
+        type=float,
+        default=la_params.line_overlap,
+        help="If two characters have more overlap than this they "
+        "are considered to be on the same line. The overlap is specified "
+        "relative to the minimum height of both characters.",
+    )
+    la_param_group.add_argument(
+        "--char-margin",
+        "-M",
+        type=float,
+        default=la_params.char_margin,
+        help="If two characters are closer together than this margin they "
+        "are considered to be part of the same line. The margin is "
+        "specified relative to the width of the character.",
+    )
+    la_param_group.add_argument(
+        "--word-margin",
+        "-W",
+        type=float,
+        default=la_params.word_margin,
+        help="If two characters on the same line are further apart than this "
+        "margin then they are considered to be two separate words, and "
+        "an intermediate space will be added for readability. The margin "
+        "is specified relative to the width of the character.",
+    )
+    la_param_group.add_argument(
+        "--line-margin",
+        "-L",
+        type=float,
+        default=la_params.line_margin,
+        help="If two lines are close together they are considered to "
+        "be part of the same paragraph. The margin is specified "
+        "relative to the height of a line.",
+    )
+    la_param_group.add_argument(
+        "--boxes-flow",
+        "-F",
+        type=float_or_disabled,
+        default=la_params.boxes_flow,
+        help="Specifies how much a horizontal and vertical position of a "
+        "text matters when determining the order of lines. The value "
+        "should be within the range of -1.0 (only horizontal position "
+        "matters) to +1.0 (only vertical position matters). You can also "
+        "pass `disabled` to disable advanced layout analysis, and "
+        "instead return text based on the position of the bottom left "
+        "corner of the text box.",
+    )
+    la_param_group.add_argument(
+        "--all-texts",
+        "-A",
+        default=la_params.all_texts,
+        action="store_true",
+        help="If layout analysis should be performed on text in figures.",
+    )
+
+    output_params = parser.add_argument_group(
+        "Output", description="Used during output generation."
+    )
+    output_params.add_argument(
+        "--outfile",
+        "-o",
+        type=str,
+        default="-",
+        help="Path to file where output is written. "
+        'Or "-" (default) to write to stdout.',
+    )
+    output_params.add_argument(
+        "--output_type",
+        "-t",
+        type=str,
+        default="text",
+        help="Type of output to generate {text,html,xml,tag}.",
+    )
+    output_params.add_argument(
+        "--codec",
+        "-c",
+        type=str,
+        default="utf-8",
+        help="Text encoding to use in output file.",
+    )
+    output_params.add_argument(
+        "--output-dir",
+        "-O",
+        default=None,
+        help="The output directory to put extracted images in. If not given, "
+        "images are not extracted.",
+    )
+    output_params.add_argument(
+        "--layoutmode",
+        "-Y",
+        default="normal",
+        type=str,
+        help="Type of layout to use when generating html "
+        "{normal,exact,loose}. If normal,each line is"
+        " positioned separately in the html. If exact"
+        ", each character is positioned separately in"
+        " the html. If loose, same result as normal "
+        "but with an additional newline after each "
+        "text line. Only used when output_type is html.",
+    )
+    output_params.add_argument(
+        "--scale",
+        "-s",
+        type=float,
+        default=1.0,
+        help="The amount of zoom to use when generating html file. "
+        "Only used when output_type is html.",
+    )
+    output_params.add_argument(
+        "--strip-control",
+        "-S",
+        default=False,
+        action="store_true",
+        help="Remove control statement from text. "
+        "Only used when output_type is xml.",
+    )
+
+    return parser
+
+
+def parse_args(args: Optional[List[str]]) -> argparse.Namespace:
+    parsed_args = create_parser().parse_args(args=args)
+
+    # Propagate parsed layout parameters to LAParams object
+    if parsed_args.no_laparams:
+        parsed_args.laparams = None
+    else:
+        parsed_args.laparams = LAParams(
+            line_overlap=parsed_args.line_overlap,
+            char_margin=parsed_args.char_margin,
+            line_margin=parsed_args.line_margin,
+            word_margin=parsed_args.word_margin,
+            boxes_flow=parsed_args.boxes_flow,
+            detect_vertical=parsed_args.detect_vertical,
+            all_texts=parsed_args.all_texts,
+        )
+
+    if parsed_args.page_numbers:
+        parsed_args.page_numbers = {x - 1 for x in parsed_args.page_numbers}
+
+    if parsed_args.pagenos:
+        parsed_args.page_numbers = {int(x) - 1 for x in parsed_args.pagenos.split(",")}
+
+    if parsed_args.output_type == "text" and parsed_args.outfile != "-":
+        for override, alttype in OUTPUT_TYPES:
+            if parsed_args.outfile.endswith(override):
+                parsed_args.output_type = alttype
+
+    return parsed_args
+
+
+def main(args: Optional[List[str]] = None) -> int:
+    parsed_args = parse_args(args)
+    outfp = extract_text(**vars(parsed_args))
+    outfp.close()
+    return 0
+
+
+if __name__ == "__main__":
+    sys.exit(main())

clara_env/bin/pdfplumber

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pdfplumber.cli import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/pip

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pip._internal.cli.main import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/pip3

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pip._internal.cli.main import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/pip3.10

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pip._internal.cli.main import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/pyftmerge

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from fontTools.merge import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/pyftsubset

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from fontTools.subset import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/pygmentize

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pygments.cmdline import main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(main())

clara_env/bin/pypdfium2

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from pypdfium2.__main__ import cli_main
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(cli_main())

clara_env/bin/pyrsa-decrypt

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from rsa.cli import decrypt
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(decrypt())

clara_env/bin/pyrsa-encrypt

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from rsa.cli import encrypt
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(encrypt())

clara_env/bin/pyrsa-keygen

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from rsa.cli import keygen
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(keygen())

clara_env/bin/pyrsa-priv2pub

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from rsa.util import private_to_public
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(private_to_public())

clara_env/bin/pyrsa-sign

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from rsa.cli import sign
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(sign())

clara_env/bin/pyrsa-verify

@@ -0,0 +1,8 @@
+#!/Users/lucas.s/Dev/clara/clara_env/bin/python3
+# -*- coding: utf-8 -*-
+import re
+import sys
+from rsa.cli import verify
+if __name__ == '__main__':
+    sys.argv[0] = re.sub(r'(-script\.pyw|\.exe)?$', '', sys.argv[0])
+    sys.exit(verify())

clara_env/bin/ruff

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:de19d5eaffe9b251eb65ad787557d8a6b8a59acfa01e494e9e44b8f74fab5d48
+size 21805272