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"""Manage FastAPI background tasks.""" | |
import asyncio | |
import functools | |
import time | |
import traceback | |
import uuid | |
from datetime import datetime, timedelta | |
from enum import Enum | |
from typing import Any, Awaitable, Callable, Iterable, Iterator, Optional, TypeVar, Union | |
import dask | |
import psutil | |
from dask import config as cfg | |
from dask.distributed import Client, Variable | |
from distributed import Future, get_client, get_worker | |
from pydantic import BaseModel, parse_obj_as | |
from tqdm import tqdm | |
from .utils import log, pretty_timedelta | |
# Disable the heartbeats of the dask workers to avoid dying after computer goes to sleep. | |
cfg.set({'distributed.scheduler.worker-ttl': None}) | |
TaskId = str | |
# ID for the step of a task. | |
TaskStepId = tuple[str, int] | |
Task = Union[Callable[..., Any], Callable[..., Awaitable[Any]]] | |
class TaskStatus(str, Enum): | |
"""Enum holding a tasks status.""" | |
PENDING = 'pending' | |
COMPLETED = 'completed' | |
ERROR = 'error' | |
class TaskStepInfo(BaseModel): | |
"""Information about a step of the task..""" | |
progress: Optional[float] | |
description: Optional[str] | |
details: Optional[str] | |
class TaskInfo(BaseModel): | |
"""Metadata about a task.""" | |
name: str | |
status: TaskStatus | |
progress: Optional[float] | |
message: Optional[str] | |
details: Optional[str] | |
# The current step's progress. | |
step_progress: Optional[float] | |
# A task may have multiple progress indicators, e.g. for chained signals that compute 3 signals. | |
steps: Optional[list[TaskStepInfo]] | |
description: Optional[str] | |
start_timestamp: str | |
end_timestamp: Optional[str] | |
error: Optional[str] | |
class TaskManifest(BaseModel): | |
"""Information for tasks that are running or completed.""" | |
tasks: dict[str, TaskInfo] | |
progress: Optional[float] | |
STEPS_LOG_KEY = 'steps' | |
class TaskManager: | |
"""Manage FastAPI background tasks.""" | |
_tasks: dict[str, TaskInfo] = {} | |
def __init__(self, dask_client: Optional[Client] = None) -> None: | |
"""By default, use a dask multi-processing client. | |
A user can pass in a dask client to use a different executor. | |
""" | |
# Set dasks workers to be non-daemonic so they can spawn child processes if they need to. This | |
# is particularly useful for signals that use libraries with multiprocessing support. | |
dask.config.set({'distributed.worker.daemon': False}) | |
total_memory_gb = psutil.virtual_memory().total / (1024**3) | |
self._dask_client = dask_client or Client( | |
asynchronous=True, memory_limit=f'{total_memory_gb} GB') | |
async def _update_tasks(self) -> None: | |
for task_id, task in self._tasks.items(): | |
if task.status == TaskStatus.COMPLETED: | |
continue | |
step_events = self._dask_client.get_events(_progress_event_topic(task_id)) | |
# This allows us to work with both sync and async clients. | |
if not isinstance(step_events, tuple): | |
step_events = await step_events | |
if step_events: | |
_, log_message = step_events[-1] | |
steps = parse_obj_as(list[TaskStepInfo], log_message[STEPS_LOG_KEY]) | |
task.steps = steps | |
if steps: | |
cur_step = 0 | |
for i, step in enumerate(reversed(steps)): | |
if step.progress is not None: | |
cur_step = len(steps) - i - 1 | |
break | |
task.details = steps[cur_step].details | |
task.step_progress = steps[cur_step].progress | |
task.progress = (sum([step.progress or 0.0 for step in steps])) / len(steps) | |
# Don't show an indefinite jump if there are multiple steps. | |
if cur_step > 0 and task.step_progress is None: | |
task.step_progress = 0.0 | |
task.message = f'Step {cur_step+1}/{len(steps)}' | |
if steps[cur_step].description: | |
task.message += f': {steps[cur_step].description}' | |
else: | |
task.progress = None | |
async def manifest(self) -> TaskManifest: | |
"""Get all tasks.""" | |
await self._update_tasks() | |
tasks_with_progress = [ | |
task.progress | |
for task in self._tasks.values() | |
if task.progress and task.status != TaskStatus.COMPLETED | |
] | |
return TaskManifest( | |
tasks=self._tasks, | |
progress=sum(tasks_with_progress) / len(tasks_with_progress) if tasks_with_progress else None) | |
def task_id(self, name: str, description: Optional[str] = None) -> TaskId: | |
"""Create a unique ID for a task.""" | |
task_id = uuid.uuid4().hex | |
self._tasks[task_id] = TaskInfo( | |
name=name, | |
status=TaskStatus.PENDING, | |
progress=None, | |
description=description, | |
start_timestamp=datetime.now().isoformat()) | |
return task_id | |
def _set_task_completed(self, task_id: TaskId, task_future: Future) -> None: | |
end_timestamp = datetime.now().isoformat() | |
self._tasks[task_id].end_timestamp = end_timestamp | |
elapsed = datetime.fromisoformat(end_timestamp) - datetime.fromisoformat( | |
self._tasks[task_id].start_timestamp) | |
elapsed_formatted = pretty_timedelta(elapsed) | |
if task_future.status == 'error': | |
self._tasks[task_id].status = TaskStatus.ERROR | |
tb = traceback.format_tb(task_future.traceback()) | |
e = task_future.exception() | |
self._tasks[task_id].error = f'{e}: \n{tb}' | |
raise e | |
else: | |
# This runs in dask callback thread, so we have to make a new event loop. | |
loop = asyncio.new_event_loop() | |
loop.run_until_complete(self._update_tasks()) | |
for step in self._tasks[task_id].steps or []: | |
step.progress = 1.0 | |
self._tasks[task_id].status = TaskStatus.COMPLETED | |
self._tasks[task_id].progress = 1.0 | |
self._tasks[task_id].message = f'Completed in {elapsed_formatted}' | |
log(f'Task completed "{task_id}": "{self._tasks[task_id].name}" in ' | |
f'{elapsed_formatted}.') | |
def execute(self, task_id: str, task: Task, *args: Any) -> None: | |
"""Create a unique ID for a task.""" | |
log(f'Scheduling task "{task_id}": "{self._tasks[task_id].name}".') | |
task_info = self._tasks[task_id] | |
task_future = self._dask_client.submit( | |
functools.partial(_execute_task, task, task_info, task_id), *args, key=task_id) | |
task_future.add_done_callback( | |
lambda task_future: self._set_task_completed(task_id, task_future)) | |
async def stop(self) -> None: | |
"""Stop the task manager and close the dask client.""" | |
await self._dask_client.close() | |
def task_manager() -> TaskManager: | |
"""The global singleton for the task manager.""" | |
return TaskManager() | |
def _execute_task(task: Task, task_info: TaskInfo, task_id: str, *args: Any) -> None: | |
get_worker().state.tasks[task_id].annotations['task_info'] = task_info | |
task(*args) | |
def _progress_event_topic(task_id: TaskId) -> Variable: | |
return f'{task_id}_progress' | |
TProgress = TypeVar('TProgress') | |
def progress(it: Union[Iterator[TProgress], Iterable[TProgress]], | |
task_step_id: Optional[TaskStepId], | |
estimated_len: Optional[int], | |
step_description: Optional[str] = None, | |
emit_every_s: float = 1.) -> Iterator[TProgress]: | |
"""An iterable wrapper that emits progress and yields the original iterable.""" | |
if not task_step_id: | |
yield from it | |
return | |
task_id, step_id = task_step_id | |
steps = get_worker_steps(task_id) | |
if not steps: | |
steps = [TaskStepInfo(description=step_description, progress=0.0)] | |
elif len(steps) <= step_id: | |
# If the step given exceeds the length of the last step, add a new step. | |
steps.append(TaskStepInfo(description=step_description, progress=0.0)) | |
else: | |
steps[step_id].description = step_description | |
steps[step_id].progress = 0.0 | |
set_worker_steps(task_id, steps) | |
estimated_len = max(1, estimated_len) if estimated_len else None | |
task_info: TaskInfo = get_worker().state.tasks[task_id].annotations['task_info'] | |
it_idx = 0 | |
start_time = time.time() | |
last_emit = time.time() - emit_every_s | |
with tqdm(it, desc=task_info.name, total=estimated_len) as tq: | |
for t in tq: | |
cur_time = time.time() | |
if estimated_len and cur_time - last_emit > emit_every_s: | |
it_per_sec = tq.format_dict['rate'] or 0.0 | |
set_worker_task_progress( | |
task_step_id=task_step_id, | |
it_idx=it_idx, | |
elapsed_sec=tq.format_dict['elapsed'] or 0.0, | |
it_per_sec=it_per_sec or 0.0, | |
estimated_total_sec=((estimated_len) / it_per_sec if it_per_sec else 0), | |
estimated_len=estimated_len) | |
last_emit = cur_time | |
yield t | |
it_idx += 1 | |
total_time = time.time() - start_time | |
set_worker_task_progress( | |
task_step_id=task_step_id, | |
it_idx=estimated_len if estimated_len else it_idx, | |
elapsed_sec=total_time, | |
it_per_sec=(estimated_len or it_idx) / total_time, | |
estimated_total_sec=total_time, | |
estimated_len=estimated_len or it_idx) | |
def set_worker_steps(task_id: TaskId, steps: list[TaskStepInfo]) -> None: | |
"""Sets up worker steps. Use to provide task step descriptions before they compute.""" | |
get_worker().log_event( | |
_progress_event_topic(task_id), {STEPS_LOG_KEY: [step.dict() for step in steps]}) | |
def get_worker_steps(task_id: TaskId) -> list[TaskStepInfo]: | |
"""Gets the last worker steps.""" | |
events = get_client().get_events(_progress_event_topic(task_id)) | |
if not events or not events[-1]: | |
return [] | |
(_, last_event) = events[-1] | |
last_info = last_event.get(STEPS_LOG_KEY) | |
return [TaskStepInfo(**step_info) for step_info in last_info] | |
def set_worker_task_progress(task_step_id: TaskStepId, it_idx: int, elapsed_sec: float, | |
it_per_sec: float, estimated_total_sec: float, | |
estimated_len: int) -> None: | |
"""Updates a task step with a progress between 0 and 1. | |
This method does not exist on the TaskManager as it is meant to be a standalone method used by | |
workers running tasks on separate processes so does not have access to task manager state. | |
""" | |
progress = float(it_idx) / estimated_len | |
task_id, step_id = task_step_id | |
steps = get_worker_steps(task_id) | |
if len(steps) <= step_id: | |
raise ValueError(f'No step with idx {step_id} exists. Got steps: {steps}') | |
steps[step_id].progress = progress | |
# 1748/1748 [elapsed 00:16<00:00, 106.30 ex/s] | |
elapsed = f'{pretty_timedelta(timedelta(seconds=elapsed_sec))}' | |
if it_idx != estimated_len: | |
# Only show estimated when in progress. | |
elapsed = f'{elapsed} < {pretty_timedelta(timedelta(seconds=estimated_total_sec))}' | |
steps[step_id].details = (f'{it_idx:,}/{estimated_len:,} ' | |
f'[{elapsed}, {it_per_sec:,.2f} ex/s]') | |
set_worker_steps(task_id, steps) | |