import os
# workaround: install old version of pytorch since detectron2 hasn't released packages for pytorch 1.9 (issue: https://github.com/facebookresearch/detectron2/issues/3158)
# os.system('pip install torch==1.8.0+cu101 torchvision==0.9.0+cu101 -f https://download.pytorch.org/whl/torch_stable.html')
os.system('pip install -q torch==1.10.0+cu111 torchvision==0.11+cu111 -f https://download.pytorch.org/whl/torch_stable.html')
# install detectron2 that matches pytorch 1.8
# See https://detectron2.readthedocs.io/tutorials/install.html for instructions
#os.system('pip install -q detectron2 -f https://dl.fbaipublicfiles.com/detectron2/wheels/cu101/torch1.8/index.html')
os.system('pip install git+https://github.com/facebookresearch/detectron2.git')
import detectron2
from detectron2.utils.logger import setup_logger
setup_logger()
import gradio as gr
import re
import string
from operator import itemgetter
import collections
import pypdf
from pypdf import PdfReader
from pypdf.errors import PdfReadError
import pypdfium2 as pdfium
import langdetect
from langdetect import detect_langs
import pandas as pd
import numpy as np
import random
import tempfile
import itertools
from matplotlib import font_manager
from PIL import Image, ImageDraw, ImageFont
import cv2
## files
import sys
sys.path.insert(0, 'files/')
import functions
from functions import *
# update pip
os.system('python -m pip install --upgrade pip')
## model / feature extractor / tokenizer
import torch
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
# model
from transformers import LayoutLMv2ForTokenClassification
model_id = "pierreguillou/layout-xlm-base-finetuned-with-DocLayNet-base-at-paragraphlevel-ml512"
model = LayoutLMv2ForTokenClassification.from_pretrained(model_id);
model.to(device);
# feature extractor
from transformers import LayoutLMv2FeatureExtractor
feature_extractor = LayoutLMv2FeatureExtractor(apply_ocr=False)
# tokenizer
from transformers import AutoTokenizer
tokenizer_id = "xlm-roberta-base"
tokenizer = AutoTokenizer.from_pretrained(tokenizer_id)
# get labels
id2label = model.config.id2label
label2id = model.config.label2id
num_labels = len(id2label)
# APP outputs
def app_outputs(uploaded_pdf):
filename, msg, images = pdf_to_images(uploaded_pdf)
num_images = len(images)
if not msg.startswith("Error with the PDF"):
# Extraction of image data (text and bounding boxes)
dataset, texts_lines, texts_pars, texts_lines_par, row_indexes, par_boxes, line_boxes, lines_par_boxes = extraction_data_from_image(images)
# prepare our data in the format of the model
encoded_dataset = dataset.map(prepare_inference_features_paragraph, batched=True, batch_size=64, remove_columns=dataset.column_names)
custom_encoded_dataset = CustomDataset(encoded_dataset, tokenizer)
# Get predictions (token level)
outputs, images_ids_list, chunk_ids, input_ids, bboxes = predictions_token_level(images, custom_encoded_dataset)
# Get predictions (paragraph level)
probs_bbox, bboxes_list_dict, input_ids_dict_dict, probs_dict_dict, df = predictions_paragraph_level(dataset, outputs, images_ids_list, chunk_ids, input_ids, bboxes)
# Get labeled images with lines bounding boxes
images = get_labeled_images(dataset, images_ids_list, bboxes_list_dict, probs_dict_dict)
img_files = list()
# get image of PDF without bounding boxes
for i in range(num_images):
if filename != "files/blank.png": img_file = f"img_{i}_" + filename.replace(".pdf", ".png")
else: img_file = filename.replace(".pdf", ".png")
img_file = img_file.replace("/", "_")
images[i].save(img_file)
img_files.append(img_file)
if num_images < max_imgboxes:
img_files += [image_blank]*(max_imgboxes - num_images)
images += [Image.open(image_blank)]*(max_imgboxes - num_images)
for count in range(max_imgboxes - num_images):
df[num_images + count] = pd.DataFrame()
else:
img_files = img_files[:max_imgboxes]
images = images[:max_imgboxes]
df = dict(itertools.islice(df.items(), max_imgboxes))
# save
csv_files = list()
for i in range(max_imgboxes):
csv_file = f"csv_{i}_" + filename.replace(".pdf", ".csv")
csv_file = csv_file.replace("/", "_")
csv_files.append(gr.File.update(value=csv_file, visible=True))
df[i].to_csv(csv_file, encoding="utf-8", index=False)
else:
img_files, images, csv_files = [""]*max_imgboxes, [""]*max_imgboxes, [""]*max_imgboxes
img_files[0], img_files[1] = image_blank, image_blank
images[0], images[1] = Image.open(image_blank), Image.open(image_blank)
csv_file = "csv_wo_content.csv"
csv_files[0], csv_files[1] = gr.File.update(value=csv_file, visible=True), gr.File.update(value=csv_file, visible=True)
df, df_empty = dict(), pd.DataFrame()
df[0], df[1] = df_empty.to_csv(csv_file, encoding="utf-8", index=False), df_empty.to_csv(csv_file, encoding="utf-8", index=False)
return msg, img_files[0], img_files[1], images[0], images[1], csv_files[0], csv_files[1], df[0], df[1]
# Gradio APP
with gr.Blocks(title="Inference APP for Document Understanding at paragraph level (v2 - LayoutXLM base)", css=".gradio-container") as demo:
gr.HTML("""
Inference APP for Document Understanding at paragraph level (v2 - LayoutXLM base)
LayoutXLM: Multimodal Pre-training for Multilingual Visually-rich Document Understanding is a Document Understanding model that uses both layout and text in order to detect labels of bounding boxes. Combined with the model XML-RoBERTa base, this finetuned model has the capacity to understand any language. Finetuned on the dataset DocLayNet base, it can classifly any bounding box (and its OCR text) to 11 labels (Caption, Footnote, Formula, List-item, Page-footer, Page-header, Picture, Section-header, Table, Text, Title).
It relies on an external OCR engine to get words and bounding boxes from the document image. Thus, let's run in this APP an OCR engine (PyTesseract) to get the bounding boxes, then run Layout XLM base (already fine-tuned on the dataset DocLayNet base at paragraph level) on the individual tokens and then, visualize the result at paragraph level!
It allows to get all pages of any PDF (of any language) with bounding boxes labeled at paragraph level and the associated dataframes with labeled data (bounding boxes, texts, labels) :-)
More information about the DocLayNet datasets, the finetuning of the model and this APP in the following blog posts: