ola_vlm/train/probe_dsg_train.py

# Adopted from https://github.com/lm-sys/FastChat. Below is the original copyright:
# Adopted from tatsu-lab@stanford_alpaca. Below is the original copyright:
#    Copyright 2023 Rohan Taori, Ishaan Gulrajani, Tianyi Zhang, Yann Dubois, Xuechen Li
#
#    Licensed under the Apache License, Version 2.0 (the "License");
#    you may not use this file except in compliance with the License.
#    You may obtain a copy of the License at
#
#        http://www.apache.org/licenses/LICENSE-2.0
#
#    Unless required by applicable law or agreed to in writing, software
#    distributed under the License is distributed on an "AS IS" BASIS,
#    WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
#    See the License for the specific language governing permissions and
#    limitations under the License.

import os
import copy
from dataclasses import dataclass, field
import json
import logging
import pathlib
from typing import Dict, Optional, Sequence, List

import numpy as np
import torch

import transformers
import tokenizers

from ola_vlm.constants import IGNORE_INDEX, IMAGE_TOKEN_INDEX, DEFAULT_IMAGE_TOKEN, DEFAULT_IM_START_TOKEN, DEFAULT_IM_END_TOKEN
from torch.utils.data import Dataset
from ola_vlm.train.llava_trainer import LLaVATrainer

from llava import conversation as conversation_lib
from ola_vlm.model import *
from ola_vlm.mm_utils import process_highres_image, process_anyres_image, process_highres_image_crop_split, tokenizer_image_token

from PIL import Image, ImageFile
from transformers import set_seed

set_seed(42)

# Enable loading of truncated images
ImageFile.LOAD_TRUNCATED_IMAGES = True


local_rank = None


def rank0_print(*args):
    if local_rank == 0:
        print(*args)


from packaging import version
IS_TOKENIZER_GREATER_THAN_0_14 = version.parse(tokenizers.__version__) >= version.parse('0.14')


@dataclass
class ModelArguments:
    model_name_or_path: Optional[str] = field(default="facebook/opt-125m")
    version: Optional[str] = field(default="v0")
    freeze_backbone: bool = field(default=False)
    tune_mm_mlp_adapter: bool = field(default=False)
    use_s2: bool = field(default=False)
    s2_scales: Optional[str] = field(default="336,1008")
    vision_tower: Optional[str] = field(default=None)
    mm_vision_select_layer: Optional[int] = field(default=-1)   # default to the last layer
    pretrain_mm_mlp_adapter: Optional[str] = field(default=None)
    mm_projector_type: Optional[str] = field(default='linear')
    mm_use_im_start_end: bool = field(default=False)
    mm_use_im_patch_token: bool = field(default=True)
    mm_patch_merge_type: Optional[str] = field(default='flat')
    mm_vision_select_feature: Optional[str] = field(default="patch")

    # visual interpretors
    image_generator: Optional[str] = field(default="stabilityai/stable-diffusion-2-1-unclip")
    image_segmentor: Optional[str] = field(default="shi-labs/oneformer_coco_swin_large") # sam_vit_l_0b3195.pth
    depth_estimator: Optional[str] = field(default="depth_anything_v2_vitl.pth")
    
    mode: Optional[str] = field(default="seg")

    # gen
    img_head_depth: Optional[int] = 1
    img_head_dim_head: Optional[int] = 32
    img_head_num_heads: Optional[int] = 4
    img_head_num_tokens: Optional[int] = 1
    img_head_output_dim: Optional[int] = 1024
    img_head_ff_mult: Optional[int] = 1

    # seg
    seg_head_depth: Optional[int] = 1
    seg_head_dim_head: Optional[int] = 32
    seg_head_num_heads: Optional[int] = 4
    seg_head_num_tokens: Optional[int] = 576
    seg_head_output_dim: Optional[int] = 1536 # 256
    seg_head_ff_mult: Optional[int] = 1
    seg_teacher: Optional[str] = "oneformer" # "sam"

    # depth
    depth_head_depth: Optional[int] = 1
    depth_head_dim_head: Optional[int] = 32
    depth_head_num_heads: Optional[int] = 4
    depth_head_num_tokens: Optional[int] = 576
    depth_head_output_dim: Optional[int] = 1024
    depth_head_ff_mult: Optional[int] = 1


@dataclass
class DataArguments:
    data_path: str = field(default=None,
                           metadata={"help": "Path to the training data."})
    lazy_preprocess: bool = False
    is_multimodal: bool = False
    image_folder: Optional[str] = field(default=None)
    image_aspect_ratio: str = 'square'


@dataclass
class TrainingArguments(transformers.TrainingArguments):
    cache_dir: Optional[str] = field(default=None)
    optim: str = field(default="adamw_torch")
    remove_unused_columns: bool = field(default=False)
    freeze_mm_mlp_adapter: bool = field(default=False)
    mpt_attn_impl: Optional[str] = field(default="triton")
    model_max_length: int = field(
        default=512,
        metadata={
            "help":
            "Maximum sequence length. Sequences will be right padded (and possibly truncated)."
        },
    )
    double_quant: bool = field(
        default=True,
        metadata={"help": "Compress the quantization statistics through double quantization."}
    )
    quant_type: str = field(
        default="nf4",
        metadata={"help": "Quantization data type to use. Should be one of `fp4` or `nf4`."}
    )
    bits: int = field(
        default=16,
        metadata={"help": "How many bits to use."}
    )
    lora_enable: bool = False
    lora_r: int = 64
    lora_alpha: int = 16
    lora_dropout: float = 0.05
    lora_weight_path: str = ""
    lora_bias: str = "none"
    mm_projector_lr: Optional[float] = None
    mm_vision_lr: Optional[float] = None
    group_by_modality_length: bool = field(default=False)


def maybe_zero_3(param, ignore_status=False, name=None):
    from deepspeed import zero
    from deepspeed.runtime.zero.partition_parameters import ZeroParamStatus
    if hasattr(param, "ds_id"):
        if param.ds_status == ZeroParamStatus.NOT_AVAILABLE:
            if not ignore_status:
                logging.warning(f"{name}: param.ds_status != ZeroParamStatus.NOT_AVAILABLE: {param.ds_status}")
        with zero.GatheredParameters([param]):
            param = param.data.detach().cpu().clone()
    else:
        param = param.detach().cpu().clone()
    return param


# Borrowed from peft.utils.get_peft_model_state_dict
def get_peft_state_maybe_zero_3(named_params, bias):
    if bias == "none":
        to_return = {k: t for k, t in named_params if "lora_" in k}
    elif bias == "all":
        to_return = {k: t for k, t in named_params if "lora_" in k or "bias" in k}
    elif bias == "lora_only":
        to_return = {}
        maybe_lora_bias = {}
        lora_bias_names = set()
        for k, t in named_params:
            if "lora_" in k:
                to_return[k] = t
                bias_name = k.split("lora_")[0] + "bias"
                lora_bias_names.add(bias_name)
            elif "bias" in k:
                maybe_lora_bias[k] = t
        for k, t in maybe_lora_bias:
            if bias_name in lora_bias_names:
                to_return[bias_name] = t
    else:
        raise NotImplementedError
    to_return = {k: maybe_zero_3(v, ignore_status=True) for k, v in to_return.items()}
    return to_return


def get_peft_state_non_lora_maybe_zero_3(named_params, require_grad_only=True):
    to_return = {k: t for k, t in named_params if "lora_" not in k}
    if require_grad_only:
        to_return = {k: t for k, t in to_return.items() if t.requires_grad}
    to_return = {k: maybe_zero_3(v, ignore_status=True).cpu() for k, v in to_return.items()}
    return to_return


def get_mm_adapter_state_maybe_zero_3(named_params, keys_to_match):
    to_return = {k: t for k, t in named_params if any(key_match in k for key_match in keys_to_match)}
    to_return = {k: maybe_zero_3(v, ignore_status=True).cpu() for k, v in to_return.items()}
    return to_return


def find_all_linear_names(model):
    cls = torch.nn.Linear
    lora_module_names = set()
    multimodal_keywords = ['mm_projector', 'vision_tower', 'vision_resampler']
    for name, module in model.named_modules():
        if any(mm_keyword in name for mm_keyword in multimodal_keywords):
            continue
        if isinstance(module, cls):
            names = name.split('.')
            lora_module_names.add(names[0] if len(names) == 1 else names[-1])

    if 'lm_head' in lora_module_names: # needed for 16-bit
        lora_module_names.remove('lm_head')
    return list(lora_module_names)


def safe_save_model_for_hf_trainer(trainer: transformers.Trainer,
                                   output_dir: str):
    """Collects the state dict and dump to disk."""

    if trainer.deepspeed:
        torch.cuda.synchronize()
        trainer.save_model(output_dir)
        return

    state_dict = trainer.model.state_dict()
    if trainer.args.should_save:
        cpu_state_dict = {
            key: value.cpu()
            for key, value in state_dict.items()
        }
        del state_dict
        trainer._save(output_dir, state_dict=cpu_state_dict)  # noqa


def smart_tokenizer_and_embedding_resize(
    special_tokens_dict: Dict,
    tokenizer: transformers.PreTrainedTokenizer,
    model: transformers.PreTrainedModel,
):
    """Resize tokenizer and embedding.

    Note: This is the unoptimized version that may make your embedding size not be divisible by 64.
    """
    num_new_tokens = tokenizer.add_special_tokens(special_tokens_dict)
    model.resize_token_embeddings(len(tokenizer))

    if num_new_tokens > 0:
        input_embeddings = model.get_input_embeddings().weight.data
        output_embeddings = model.get_output_embeddings().weight.data

        input_embeddings_avg = input_embeddings[:-num_new_tokens].mean(
            dim=0, keepdim=True)
        output_embeddings_avg = output_embeddings[:-num_new_tokens].mean(
            dim=0, keepdim=True)

        input_embeddings[-num_new_tokens:] = input_embeddings_avg
        output_embeddings[-num_new_tokens:] = output_embeddings_avg


def _tokenize_fn(strings: Sequence[str],
                 tokenizer: transformers.PreTrainedTokenizer) -> Dict:
    """Tokenize a list of strings."""
    tokenized_list = [
        tokenizer(
            text,
            return_tensors="pt",
            padding="longest",
            max_length=tokenizer.model_max_length,
            truncation=True,
        ) for text in strings
    ]
    input_ids = labels = [
        tokenized.input_ids[0] for tokenized in tokenized_list
    ]
    input_ids_lens = labels_lens = [
        tokenized.input_ids.ne(tokenizer.pad_token_id).sum().item()
        for tokenized in tokenized_list
    ]
    return dict(
        input_ids=input_ids,
        labels=labels,
        input_ids_lens=input_ids_lens,
        labels_lens=labels_lens,
    )


def _mask_targets(target, tokenized_lens, speakers):
    # cur_idx = 0
    cur_idx = tokenized_lens[0]
    tokenized_lens = tokenized_lens[1:]
    target[:cur_idx] = IGNORE_INDEX
    for tokenized_len, speaker in zip(tokenized_lens, speakers):
        if speaker == "human":
            target[cur_idx+2:cur_idx + tokenized_len] = IGNORE_INDEX
        cur_idx += tokenized_len


def _add_speaker_and_signal(header, source, get_conversation=True):
    """Add speaker and start/end signal on each round."""
    BEGIN_SIGNAL = "### "
    END_SIGNAL = "\n"
    conversation = header
    for sentence in source:
        from_str = sentence["from"]
        if from_str.lower() == "human":
            from_str = conversation_lib.default_conversation.roles[0]
        elif from_str.lower() == "gpt":
            from_str = conversation_lib.default_conversation.roles[1]
        else:
            from_str = 'unknown'
        sentence["value"] = (BEGIN_SIGNAL + from_str + ": " +
                             sentence["value"] + END_SIGNAL)
        if get_conversation:
            conversation += sentence["value"]
    conversation += BEGIN_SIGNAL
    return conversation


def preprocess_multimodal(
    sources: Sequence[str],
    data_args: DataArguments
) -> Dict:
    is_multimodal = data_args.is_multimodal
    if not is_multimodal:
        return sources

    for source in sources:
        for sentence in source:
            if DEFAULT_IMAGE_TOKEN in sentence['value']:
                sentence['value'] = sentence['value'].replace(DEFAULT_IMAGE_TOKEN, '').strip()
                sentence['value'] = DEFAULT_IMAGE_TOKEN + '\n' + sentence['value']
                sentence['value'] = sentence['value'].strip()
                if "mmtag" in conversation_lib.default_conversation.version:
                    sentence['value'] = sentence['value'].replace(DEFAULT_IMAGE_TOKEN, '<Image>' + DEFAULT_IMAGE_TOKEN + '</Image>')
            replace_token = DEFAULT_IMAGE_TOKEN
            if data_args.mm_use_im_start_end:
                replace_token = DEFAULT_IM_START_TOKEN + replace_token + DEFAULT_IM_END_TOKEN
            sentence["value"] = sentence["value"].replace(DEFAULT_IMAGE_TOKEN, replace_token)

    return sources


def preprocess_phi_3(
    sources,
    tokenizer: transformers.PreTrainedTokenizer,
    has_image: bool = False
) -> Dict:
    conv = conversation_lib.default_conversation.copy()
    roles = {"human": conv.roles[0], "gpt": conv.roles[1]}

    # Apply prompt templates
    conversations = []
    for i, source in enumerate(sources):
        if roles[source[0]["from"]] != conv.roles[0]:
            # Skip the first one if it is not from human
            source = source[1:]

        conv.messages = []
        for j, sentence in enumerate(source):
            role = roles[sentence["from"]]
            assert role == conv.roles[j % 2], f"{i}"
            conv.append_message(role, sentence["value"])
        conversations.append(conv.get_prompt())

    # Tokenize conversations

    if has_image:
        input_ids = torch.stack([tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations], dim=0)
    else:
        input_ids = tokenizer(
            conversations,
            return_tensors="pt",
            padding="longest",
            max_length=tokenizer.model_max_length,
            truncation=True,
        ).input_ids
 
    targets = input_ids.clone()
    assert conv.sep_style == conversation_lib.SeparatorStyle.MPT

    return dict(
        input_ids=input_ids,
        labels=targets,
    )

def preprocess_llama_3(
    sources,
    tokenizer: transformers.PreTrainedTokenizer,
    has_image: bool = False
) -> Dict:
    conv = conversation_lib.default_conversation.copy()
    roles = {"human": conv.roles[0], "gpt": conv.roles[1]}

    # Apply prompt templates
    conversations = []
    for i, source in enumerate(sources):
        if roles[source[0]["from"]] != conv.roles[0]:
            # Skip the first one if it is not from human
            source = source[1:]

        conv.messages = []
        for j, sentence in enumerate(source):
            role = roles[sentence["from"]]
            assert role == conv.roles[j % 2], f"{i}"
            conv.append_message(role, sentence["value"])
        conversations.append(conv.get_prompt())

    # Tokenize conversations

    if has_image:
        input_ids = torch.stack(
            [tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations], dim=0)
    else:
        input_ids = tokenizer(
            conversations,
            return_tensors="pt",
            padding="longest",
            max_length=tokenizer.model_max_length,
            truncation=True,
        ).input_ids

    targets = input_ids.clone()
    assert conv.sep_style == conversation_lib.SeparatorStyle.MPT

    # Mask targets
    sep = conv.sep + conv.roles[1]

    for conversation, target in zip(conversations, targets):
        total_len = int(target.ne(tokenizer.pad_token_id).sum())

        rounds = conversation.split(conv.sep)
        re_rounds = [conv.sep.join(rounds[:3])]
        for conv_idx in range(3, len(rounds), 2):
            re_rounds.append(conv.sep.join(rounds[conv_idx:conv_idx + 2]))
        cur_len = 1
        target[:cur_len] = IGNORE_INDEX

        for i, rou in enumerate(re_rounds):
            if rou == "":
                break

            parts = rou.split(sep)
            if len(parts) != 2:
                break
            parts[0] += sep

            if has_image:
                round_len = len(tokenizer_image_token(rou, tokenizer))
                instruction_len = len(tokenizer_image_token(parts[0], tokenizer)) - 2
            else:
                round_len = len(tokenizer(rou).input_ids)
                instruction_len = len(tokenizer(parts[0]).input_ids) - 2

            # if i > 0:
            #     round_len -= 1
            #     instruction_len -= 1
            
            target[cur_len: cur_len + instruction_len] = IGNORE_INDEX

            cur_len += round_len
        target[cur_len:] = IGNORE_INDEX

        if cur_len < tokenizer.model_max_length:
            if cur_len != total_len:
                target[:] = IGNORE_INDEX
                print(
                    f"WARNING: tokenization mismatch: {cur_len} vs. {total_len}."
                    f" (ignored)"
                )
                
    return dict(
        input_ids=input_ids,
        labels=targets,
    )


def preprocess_llama_2(
    sources,
    tokenizer: transformers.PreTrainedTokenizer,
    has_image: bool = False
) -> Dict:
    conv = conversation_lib.default_conversation.copy()
    roles = {"human": conv.roles[0], "gpt": conv.roles[1]}

    # Apply prompt templates
    conversations = []
    for i, source in enumerate(sources):
        if roles[source[0]["from"]] != conv.roles[0]:
            # Skip the first one if it is not from human
            source = source[1:]

        conv.messages = []
        for j, sentence in enumerate(source):
            role = roles[sentence["from"]]
            assert role == conv.roles[j % 2], f"{i}"
            conv.append_message(role, sentence["value"])
        conversations.append(conv.get_prompt())

    # Tokenize conversations

    if has_image:
        input_ids = torch.stack([tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations], dim=0)
    else:
        input_ids = tokenizer(
            conversations,
            return_tensors="pt",
            padding="longest",
            max_length=tokenizer.model_max_length,
            truncation=True,
        ).input_ids

    targets = input_ids.clone()

    assert conv.sep_style == conversation_lib.SeparatorStyle.LLAMA_2

    # Mask targets
    sep = "[/INST] "
    for conversation, target in zip(conversations, targets):
        total_len = int(target.ne(tokenizer.pad_token_id).sum())

        rounds = conversation.split(conv.sep2)
        cur_len = 1
        target[:cur_len] = IGNORE_INDEX
        for i, rou in enumerate(rounds):
            if rou == "":
                break

            parts = rou.split(sep)
            if len(parts) != 2:
                break
            parts[0] += sep

            if has_image:
                round_len = len(tokenizer_image_token(rou, tokenizer))
                instruction_len = len(tokenizer_image_token(parts[0], tokenizer)) - 2
            else:
                round_len = len(tokenizer(rou).input_ids)
                instruction_len = len(tokenizer(parts[0]).input_ids) - 2

            target[cur_len : cur_len + instruction_len] = IGNORE_INDEX

            cur_len += round_len
        target[cur_len:] = IGNORE_INDEX

        if cur_len < tokenizer.model_max_length:
            if cur_len != total_len:
                target[:] = IGNORE_INDEX
                print(
                    f"WARNING: tokenization mismatch: {cur_len} vs. {total_len}."
                    f" (ignored)"
                )

    return dict(
        input_ids=input_ids,
        labels=targets,
    )

def preprocess_qwen(
        sources, 
        tokenizer: transformers.PreTrainedTokenizer, 
        has_image: bool = False, 
        system_message: str = "You are a helpful assistant."
    ) -> Dict:
    # roles = {"human": "<|im_start|>user", "gpt": "<|im_start|>assistant"}
    roles = {"human": "user", "gpt": "assistant"}

    # Add image tokens to tokenizer as a special tokens
    # Use a deepcopy of tokenizer so that we don't modify on the tokenizer
    tokenizer = copy.deepcopy(tokenizer)
    # When there is actually an image, we add the image tokens as a special token
    if has_image:
        tokenizer.add_tokens(["<image>"], special_tokens=True)

    image_token_index = tokenizer.convert_tokens_to_ids("<image>")
    im_start, im_end = tokenizer.additional_special_tokens_ids
    # unmask_tokens = ["<|im_start|>", "<|im_start|>", "\n"]
    unmask_tokens_idx =  [198, im_start, im_end]
    nl_tokens = tokenizer("\n").input_ids

    # Reset Qwen chat templates so that it won't include system message every time we apply
    chat_template = "{% for message in messages %}{{'<|im_start|>' + message['role'] + '\n' + message['content'] + '<|im_end|>' + '\n'}}{% endfor %}{% if add_generation_prompt %}{{ '<|im_start|>assistant\n' }}{% endif %}"
    tokenizer.chat_template = chat_template

    # _system = tokenizer("system").input_ids + nl_tokens
    # _user = tokenizer("user").input_ids + nl_tokens
    # _assistant = tokenizer("assistant").input_ids + nl_tokens

    # Apply prompt templates
    input_ids, targets = [], []
    for i, source in enumerate(sources):
        if roles[source[0]["from"]] != roles["human"]:
            source = source[1:]

        input_id, target = [], []

        # New version, use apply chat template
        # Build system message for each sentence
        input_id += tokenizer.apply_chat_template([{"role" : "system", "content" : system_message}])
        target += [IGNORE_INDEX] * len(input_id)

        for conv in source:
            # Make sure llava data can load
            try:
                role = conv["role"]
                content = conv["content"]
            except:
                role = conv["from"]
                content = conv["value"]

            role =  roles.get(role, role)
            
            conv = [{"role" : role, "content" : content}]
            encode_id = tokenizer.apply_chat_template(conv)
            input_id += encode_id
            if role in ["user", "system"]:
                target += [IGNORE_INDEX] * len(encode_id)
            else:
                target += encode_id
                    
        assert len(input_id) == len(target), f"{len(input_id)} != {len(target)}"
        for idx, encode_id in enumerate(input_id):
            if encode_id in unmask_tokens_idx:
                target[idx] = encode_id
            if encode_id == image_token_index:
                input_id[idx] = IMAGE_TOKEN_INDEX
        input_ids.append(input_id)
        targets.append(target)
    input_ids = torch.tensor(input_ids, dtype=torch.long)
    targets = torch.tensor(targets, dtype=torch.long)

    return dict(
        input_ids=input_ids,  # tensor(bs x seq_len)
        labels=targets,  # tensor(bs x seq_len)
    )

def preprocess_v1(
    sources,
    tokenizer: transformers.PreTrainedTokenizer,
    has_image: bool = False
) -> Dict:
    conv = conversation_lib.default_conversation.copy()
    roles = {"human": conv.roles[0], "gpt": conv.roles[1]}

    # Apply prompt templates
    conversations = []
    for i, source in enumerate(sources):
        if roles[source[0]["from"]] != conv.roles[0]:
            # Skip the first one if it is not from human
            source = source[1:]

        conv.messages = []
        for j, sentence in enumerate(source):
            role = roles[sentence["from"]]
            assert role == conv.roles[j % 2], f"{i}"
            conv.append_message(role, sentence["value"])
        conversations.append(conv.get_prompt())

    # Tokenize conversations

    if has_image:
        input_ids = torch.stack([tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations], dim=0)
    else:
        input_ids = tokenizer(
            conversations,
            return_tensors="pt",
            padding="longest",
            max_length=tokenizer.model_max_length,
            truncation=True,
        ).input_ids

    targets = input_ids.clone()

    assert conv.sep_style == conversation_lib.SeparatorStyle.TWO

    # Mask targets
    sep = conv.sep + conv.roles[1] + ": "
    for conversation, target in zip(conversations, targets):
        total_len = int(target.ne(tokenizer.pad_token_id).sum())

        rounds = conversation.split(conv.sep2)
        cur_len = 1
        target[:cur_len] = IGNORE_INDEX
        for i, rou in enumerate(rounds):
            if rou == "":
                break

            parts = rou.split(sep)
            if len(parts) != 2:
                break
            parts[0] += sep

            if has_image:
                round_len = len(tokenizer_image_token(rou, tokenizer))
                instruction_len = len(tokenizer_image_token(parts[0], tokenizer)) - 2
            else:
                round_len = len(tokenizer(rou).input_ids)
                instruction_len = len(tokenizer(parts[0]).input_ids) - 2

            if i != 0 and not tokenizer.legacy and IS_TOKENIZER_GREATER_THAN_0_14:
                round_len -= 1
                instruction_len -= 1

            target[cur_len : cur_len + instruction_len] = IGNORE_INDEX

            cur_len += round_len
        target[cur_len:] = IGNORE_INDEX

        if cur_len < tokenizer.model_max_length:
            if cur_len != total_len:
                target[:] = IGNORE_INDEX
                print(
                    f"WARNING: tokenization mismatch: {cur_len} vs. {total_len}."
                    f" (ignored)"
                )
    return dict(
        input_ids=input_ids,
        labels=targets,
    )


def preprocess(
    sources: Sequence[str],
    tokenizer: transformers.PreTrainedTokenizer,
    has_image: bool = False
) -> Dict:
    """
    Given a list of sources, each is a conversation list. This transform:
    1. Add signal '### ' at the beginning each sentence, with end signal '\n';
    2. Concatenate conversations together;
    3. Tokenize the concatenated conversation;
    4. Make a deepcopy as the target. Mask human words with IGNORE_INDEX.
    """
    if conversation_lib.default_conversation.version == "llama3":
        return preprocess_llama_3(sources, tokenizer, has_image=has_image)
    if conversation_lib.default_conversation.version == "phi3":
        return preprocess_phi_3(sources, tokenizer, has_image=has_image)
    if conversation_lib.default_conversation.version == "qwen":
        return preprocess_qwen(sources, tokenizer, has_image=has_image)
    if conversation_lib.default_conversation.sep_style == conversation_lib.SeparatorStyle.LLAMA_2:
        return preprocess_llama_2(sources, tokenizer, has_image=has_image)
    if conversation_lib.default_conversation.version.startswith("v1"):
        return preprocess_v1(sources, tokenizer, has_image=has_image)
    # add end signal and concatenate together
    conversations = []
    for source in sources:
        header = f"{conversation_lib.default_conversation.system}\n\n"
        conversation = _add_speaker_and_signal(header, source)
        conversations.append(conversation)
    # tokenize conversations
    def get_tokenize_len(prompts):
        return [len(tokenizer_image_token(prompt, tokenizer)) for prompt in prompts]

    if has_image:
        input_ids = [tokenizer_image_token(prompt, tokenizer, return_tensors='pt') for prompt in conversations]
    else:
        conversations_tokenized = _tokenize_fn(conversations, tokenizer)
        input_ids = conversations_tokenized["input_ids"]

    targets = copy.deepcopy(input_ids)
    for target, source in zip(targets, sources):
        if has_image:
            tokenized_lens = get_tokenize_len([header] + [s["value"] for s in source])
        else:
            tokenized_lens = _tokenize_fn([header] + [s["value"] for s in source], tokenizer)["input_ids_lens"]
        speakers = [sentence["from"] for sentence in source]
        _mask_targets(target, tokenized_lens, speakers)

    return dict(input_ids=input_ids, labels=targets)

def parse_json(file):
    with open(file) as f:
        data = json.load(f)
    return data

def prepare_coco(json_file):
    from tqdm import tqdm

    coco_data = parse_json(json_file)

    id_to_filename = {image["id"]: image["file_name"] for image in coco_data["images"]}
    processed_image_ids = set()
    list_data_dict = []

    for annotation in tqdm(coco_data["annotations"]):
        image_id = annotation["image_id"]
        if image_id in processed_image_ids:
            continue
        file_name = id_to_filename[image_id]
        processed_image_ids.add(image_id)

        question = "Describe the image in two lines.\n<image>"
        conversations = [
            {"from": "human", "value": question},
            {"from": "gpt", "value": "n"}
        ]

        list_data_dict.append(
            {
                "conversations": conversations,
                "image": "train2017/" + file_name,
            }
        )

    return list_data_dict


class LazySupervisedDataset(Dataset):
    """Dataset for supervised fine-tuning."""

    def __init__(self, data_path: str,
                 tokenizer: transformers.PreTrainedTokenizer,
                 data_args: DataArguments):
        super(LazySupervisedDataset, self).__init__()
        list_data_dict = prepare_coco(data_path)

        rank0_print("Formatting inputs...Skip in lazy mode")
        self.tokenizer = tokenizer
        self.list_data_dict = list_data_dict
        self.data_args = data_args

    def __len__(self):
        return len(self.list_data_dict)

    @property
    def lengths(self):
        length_list = []
        for sample in self.list_data_dict:
            img_tokens = 128 if 'image' in sample else 0
            length_list.append(sum(len(conv['value'].split()) for conv in sample['conversations']) + img_tokens)
        return length_list

    @property
    def modality_lengths(self):
        length_list = []
        for sample in self.list_data_dict:
            cur_len = sum(len(conv['value'].split()) for conv in sample['conversations'])
            cur_len = cur_len if 'image' in sample else -cur_len
            length_list.append(cur_len)
        return length_list

    def __getitem__(self, i) -> Dict[str, torch.Tensor]:
        sources = self.list_data_dict[i]
        if isinstance(i, int):
            sources = [sources]
        assert len(sources) == 1, "Don't know why it is wrapped to a list"  # FIXME

        if 'image' in sources[0]:
            image_file = self.list_data_dict[i]['image']
            image_folder = self.data_args.image_folder
            processor = self.data_args.image_processor
            try:
                crop_size = self.data_args.image_processor.crop_size
            except:
                crop_size = self.data_args.image_processor.size
            pil_image = Image.open(os.path.join(image_folder, image_file)).convert('RGB')
            image = Image.open(os.path.join(image_folder, image_file)).convert('RGB')
            image_size = image.size

            if self.data_args.image_aspect_ratio == "highres":
                image = process_highres_image(image, self.data_args.image_processor, self.data_args.image_grid_pinpoints)
            elif self.data_args.image_aspect_ratio == "anyres" or "anyres_max" in self.data_args.image_aspect_ratio:
                image = process_anyres_image(image, self.data_args.image_processor, self.data_args.image_grid_pinpoints)
            elif self.data_args.image_aspect_ratio == "crop_split":
                image = process_highres_image_crop_split(image, self.data_args)
            elif self.data_args.image_aspect_ratio == 'pad':
                def expand2square(pil_img, background_color):
                    width, height = pil_img.size
                    if width == height:
                        return pil_img
                    elif width > height:
                        result = Image.new(pil_img.mode, (width, width), background_color)
                        result.paste(pil_img, (0, (width - height) // 2))
                        return result
                    else:
                        result = Image.new(pil_img.mode, (height, height), background_color)
                        result.paste(pil_img, ((height - width) // 2, 0))
                        return result
                image = expand2square(image, tuple(int(x*255) for x in processor.image_mean))
                image = processor.preprocess(image, return_tensors='pt')['pixel_values'][0]
            else:
                image = processor.preprocess(image, return_tensors='pt')['pixel_values'][0]
            sources = preprocess_multimodal(
                copy.deepcopy([e["conversations"] for e in sources]),
                self.data_args)
        else:
            sources = copy.deepcopy([e["conversations"] for e in sources])

        data_dict = preprocess(
            sources,
            self.tokenizer,
            has_image=('image' in self.list_data_dict[i]))
        if isinstance(i, int):
            data_dict = dict(input_ids=data_dict["input_ids"][0],
                             labels=data_dict["labels"][0])

        # image exist in the data
        if 'image' in self.list_data_dict[i]:
            data_dict['image'] = image
            data_dict['pil_image'] = pil_image
            data_dict['image_size'] = image_size
        elif self.data_args.is_multimodal:
            # image does not exist in the data, but the model is multimodal
            try:
                crop_size = self.data_args.image_processor.crop_size
            except:
                crop_size = self.data_args.image_processor.size
            data_dict['image'] = torch.zeros(3, crop_size['height'], crop_size['width'])
            data_dict['pil_image'] = Image.new('RGB', (crop_size['width'], crop_size['height']), color='black')
            data_dict['image_size'] = (crop_size['width'], crop_size['height'])

        return data_dict


@dataclass
class DataCollatorForSupervisedDataset(object):
    """Collate examples for supervised fine-tuning."""

    tokenizer: transformers.PreTrainedTokenizer

    def __call__(self, instances: Sequence[Dict]) -> Dict[str, torch.Tensor]:
        input_ids, labels = tuple([instance[key] for instance in instances]
                                  for key in ("input_ids", "labels"))
        input_ids = torch.nn.utils.rnn.pad_sequence(
            input_ids,
            batch_first=True,
            padding_value=self.tokenizer.pad_token_id)
        labels = torch.nn.utils.rnn.pad_sequence(labels,
                                                 batch_first=True,
                                                 padding_value=IGNORE_INDEX)
        input_ids = input_ids[:, :self.tokenizer.model_max_length]
        labels = labels[:, :self.tokenizer.model_max_length]
        batch = dict(
            input_ids=input_ids,
            labels=labels,
            attention_mask=input_ids.ne(self.tokenizer.pad_token_id),
        )

        if 'image' in instances[0]:
            images = [instance['image'] for instance in instances]
            if all(x is not None and x.shape == images[0].shape for x in images):
                batch['images'] = torch.stack(images)
            else:
                batch['images'] = images
            batch['image_sizes'] = [instance['image_size'] for instance in instances]
        
        if 'pil_image' in instances[0]:
            pil_images = [instance['pil_image'] for instance in instances]
            batch['pil_images'] = pil_images
        
        return batch


def make_supervised_data_module(tokenizer: transformers.PreTrainedTokenizer,
                                data_args) -> Dict:
    """Make dataset and collator for supervised fine-tuning."""
    train_dataset = LazySupervisedDataset(tokenizer=tokenizer,
                                data_path=data_args.data_path,
                                data_args=data_args)
    data_collator = DataCollatorForSupervisedDataset(tokenizer=tokenizer)
    return dict(train_dataset=train_dataset,
                eval_dataset=None,
                data_collator=data_collator)


def train(attn_implementation=None):
    global local_rank

    parser = transformers.HfArgumentParser(
        (ModelArguments, DataArguments, TrainingArguments))
    model_args, data_args, training_args = parser.parse_args_into_dataclasses()
    local_rank = training_args.local_rank
    compute_dtype = (torch.float16 if training_args.fp16 else (torch.bfloat16 if training_args.bf16 else torch.float32))

    bnb_model_from_pretrained_args = {}
    if training_args.bits in [4, 8]:
        from transformers import BitsAndBytesConfig
        bnb_model_from_pretrained_args.update(dict(
            device_map={"": training_args.device},
            load_in_4bit=training_args.bits == 4,
            load_in_8bit=training_args.bits == 8,
            quantization_config=BitsAndBytesConfig(
                load_in_4bit=training_args.bits == 4,
                load_in_8bit=training_args.bits == 8,
                llm_int8_skip_modules=["mm_projector"],
                llm_int8_threshold=6.0,
                llm_int8_has_fp16_weight=False,
                bnb_4bit_compute_dtype=compute_dtype,
                bnb_4bit_use_double_quant=training_args.double_quant,
                bnb_4bit_quant_type=training_args.quant_type # {'fp4', 'nf4'}
            )
        ))

    if model_args.vision_tower is not None:
        if 'phi' in model_args.model_name_or_path.lower():
            model = ProbeDSGLlavaPhi3ForCausalLM.from_pretrained(
                model_args.model_name_or_path,
                cache_dir=training_args.cache_dir,
                attn_implementation=attn_implementation,
                torch_dtype=(torch.bfloat16 if training_args.bf16 else None),
                **bnb_model_from_pretrained_args
            )
        elif 'qwen' in model_args.model_name_or_path.lower():
            model = ProbeDSGLlavaQwen2ForCausalLM.from_pretrained(
                model_args.model_name_or_path,
                cache_dir=training_args.cache_dir,
                attn_implementation=attn_implementation,
                torch_dtype=(torch.bfloat16 if training_args.bf16 else None),
                **bnb_model_from_pretrained_args
            )
        else:
            model = ProbeDSGLlavaLlamaForCausalLM.from_pretrained(
                model_args.model_name_or_path,
                cache_dir=training_args.cache_dir,
                attn_implementation=attn_implementation,
                torch_dtype=(torch.bfloat16 if training_args.bf16 else None),
                **bnb_model_from_pretrained_args
            )
    else:
        if 'phi' in model_args.model_name_or_path.lower():
            model = transformers.Phi3ForCausalLM.from_pretrained(
                model_args.model_name_or_path,
                cache_dir=training_args.cache_dir,
                attn_implementation=attn_implementation,
                torch_dtype=(torch.bfloat16 if training_args.bf16 else None),
                **bnb_model_from_pretrained_args
            )
        elif 'qwen2' in model_args.model_name_or_path.lower():
            model = transformers.Qwen2ForCausalLM.from_pretrained(
                model_args.model_name_or_path,
                cache_dir=training_args.cache_dir,
                attn_implementation=attn_implementation,
                torch_dtype=(torch.bfloat16 if training_args.bf16 else None),
                **bnb_model_from_pretrained_args
            )
        else:
            model = transformers.LlamaForCausalLM.from_pretrained(
                model_args.model_name_or_path,
                cache_dir=training_args.cache_dir,
                attn_implementation=attn_implementation,
                torch_dtype=(torch.bfloat16 if training_args.bf16 else None),
                **bnb_model_from_pretrained_args
            )
    model.config.use_cache = False

    if model_args.freeze_backbone:
        model.model.requires_grad_(False)

    if training_args.bits in [4, 8]:
        from peft import prepare_model_for_kbit_training
        model.config.torch_dtype=(torch.float32 if training_args.fp16 else (torch.bfloat16 if training_args.bf16 else torch.float32))
        model = prepare_model_for_kbit_training(model, use_gradient_checkpointing=training_args.gradient_checkpointing)

    if training_args.gradient_checkpointing:
        if hasattr(model, "enable_input_require_grads"):
            model.enable_input_require_grads()
        else:
            def make_inputs_require_grad(module, input, output):
                output.requires_grad_(True)
            model.get_input_embeddings().register_forward_hook(make_inputs_require_grad)

    if training_args.lora_enable:
        from peft import LoraConfig, get_peft_model
        lora_config = LoraConfig(
            r=training_args.lora_r,
            lora_alpha=training_args.lora_alpha,
            target_modules=find_all_linear_names(model),
            lora_dropout=training_args.lora_dropout,
            bias=training_args.lora_bias,
            task_type="CAUSAL_LM",
        )
        if training_args.bits == 16:
            if training_args.bf16:
                model.to(torch.bfloat16)
            if training_args.fp16:
                model.to(torch.float16)
        rank0_print("Adding LoRA adapters...")
        model = get_peft_model(model, lora_config)
    
    if "qwen" in model_args.model_name_or_path.lower():
        tokenizer = transformers.AutoTokenizer.from_pretrained(model_args.model_name_or_path, cache_dir=training_args.cache_dir, model_max_length=training_args.model_max_length, padding_side="right")
    else:
        tokenizer = transformers.AutoTokenizer.from_pretrained(
            model_args.model_name_or_path,
            cache_dir=training_args.cache_dir,
            model_max_length=training_args.model_max_length,
            padding_side="right",
            use_fast=False,
        )

    if tokenizer.pad_token is None:
        tokenizer.pad_token = tokenizer.unk_token
    if tokenizer.pad_token_id is None:
        smart_tokenizer_and_embedding_resize(
                special_tokens_dict=dict(pad_token="<pad>"),
                tokenizer=tokenizer,
                model=model,
            )

    if model_args.version in conversation_lib.conv_templates:
        conversation_lib.default_conversation = conversation_lib.conv_templates[model_args.version]
    else:
        conversation_lib.default_conversation = conversation_lib.conv_templates["llava_phi_3"]


    vision_tower = model.get_vision_tower()

    if vision_tower is None:
        model.get_model().initialize_vision_modules(
            model_args=model_args,
            fsdp=training_args.fsdp
        )
        vision_tower = model.get_vision_tower()

    if not vision_tower.is_loaded:
        vision_tower.load_model()
    vision_tower.to(dtype=torch.bfloat16 if training_args.bf16 else torch.float16, device=training_args.device)

    data_args.image_processor = vision_tower.image_processor
    data_args.is_multimodal = True
    data_args.mode = model_args.mode

    if not hasattr(model.config, "image_grid_pinpoints"):
        model.config.image_grid_pinpoints = [[336,672], [672,336], [672,672], [1008,336], [336,1008]]        
        model.config.image_aspect_ratio = data_args.image_aspect_ratio
    else:
        data_args.image_aspect_ratio = model.config.image_aspect_ratio
        data_args.image_grid_pinpoints = model.config.image_grid_pinpoints
    
    model.config.tokenizer_padding_side = tokenizer.padding_side
    model.config.tokenizer_model_max_length = tokenizer.model_max_length

    model.config.tune_mm_mlp_adapter = training_args.tune_mm_mlp_adapter = model_args.tune_mm_mlp_adapter

    if training_args.bits in [4, 8]:
        model.get_model().mm_projector.to(dtype=compute_dtype, device=training_args.device)

    model.config.mm_use_im_start_end = data_args.mm_use_im_start_end = model_args.mm_use_im_start_end
    model.config.mm_projector_lr = training_args.mm_projector_lr
    training_args.use_im_start_end = model_args.mm_use_im_start_end
    model.config.mm_use_im_patch_token = model_args.mm_use_im_patch_token
    model.initialize_vision_tokenizer(model_args, tokenizer=tokenizer)

    model.config.use_s2 = model_args.use_s2
    model.config.s2_scales = model_args.s2_scales
    model.config.probe_mode = model_args.mode

    model.requires_grad_(False)

    if model.config.probe_mode == "gen":
        model.config.image_gen = {
            "depth": model_args.img_head_depth,
            "dim_head": model_args.img_head_dim_head,
            "num_heads": model_args.img_head_num_heads,
            "num_tokens": model_args.img_head_num_tokens,
            "output_dim": model_args.img_head_output_dim,
            "ff_mult": model_args.img_head_ff_mult,
        }
        model.config.image_generator = model_args.image_generator
    elif model.config.probe_mode == "seg":
        model.config.image_seg = {
            "depth": model_args.seg_head_depth,
            "dim_head": model_args.seg_head_dim_head,
            "num_heads": model_args.seg_head_num_heads,
            "num_tokens": model_args.seg_head_num_tokens,
            "output_dim": model_args.seg_head_output_dim,
            "ff_mult": model_args.seg_head_ff_mult,
            "seg_teacher": model_args.seg_teacher,
        }
        model.config.image_segmentor = model_args.image_segmentor
    elif model.config.probe_mode == "depth":
        model.config.image_depth = {
            "depth": model_args.depth_head_depth,
            "dim_head": model_args.depth_head_dim_head,
            "num_heads": model_args.depth_head_num_heads,
            "num_tokens": model_args.depth_head_num_tokens,
            "output_dim": model_args.depth_head_output_dim,
            "ff_mult": model_args.depth_head_ff_mult,
        }
        model.config.depth_estimator = model_args.depth_estimator

    model.init_heads(model.config)

    for p in model.lm_head.parameters():
        p.requires_grad = False

    for p in model.get_model().mm_projector.parameters():
        p.requires_grad = False

    import torch.distributed as dist
    from icecream import ic
    if dist.get_rank() == 0:
        gen_heads = 0
        depth_heads = 0
        seg_heads = 0
        for n, p in model.named_parameters():
            if p.requires_grad:
                if "gen_head" in n:
                    gen_heads += p.numel()
                elif "depth_head" in n:
                    depth_heads += p.numel()
                elif "seg_head" in n:
                    seg_heads += p.numel()
                ic(n)
        ic(depth_heads, gen_heads, seg_heads)

    if training_args.bits in [4, 8]:
        from peft.tuners.lora import LoraLayer
        for name, module in model.named_modules():
            if isinstance(module, LoraLayer):
                if training_args.bf16:
                    module = module.to(torch.bfloat16)
            if 'norm' in name:
                module = module.to(torch.float32)
            if 'lm_head' in name or 'embed_tokens' in name:
                if hasattr(module, 'weight'):
                    if training_args.bf16 and module.weight.dtype == torch.float32:
                        module = module.to(torch.bfloat16)

    data_module = make_supervised_data_module(tokenizer=tokenizer,
                                              data_args=data_args)
    trainer = LLaVATrainer(model=model,
                    tokenizer=tokenizer,
                    args=training_args,
                    **data_module)

    if list(pathlib.Path(training_args.output_dir).glob("checkpoint-*")):
        trainer.train(resume_from_checkpoint=True)
    else:
        trainer.train()
    trainer.save_state()

    model.config.use_cache = True

    if training_args.lora_enable:
        state_dict = get_peft_state_maybe_zero_3(
            model.named_parameters(), training_args.lora_bias
        )
        non_lora_state_dict = get_peft_state_non_lora_maybe_zero_3(
            model.named_parameters()
        )
        if training_args.local_rank == 0 or training_args.local_rank == -1:
            model.config.save_pretrained(training_args.output_dir)
            model.save_pretrained(training_args.output_dir, state_dict=state_dict)
            torch.save(non_lora_state_dict, os.path.join(training_args.output_dir, 'non_lora_trainables.bin'))
    else:
        safe_save_model_for_hf_trainer(trainer=trainer,
                                       output_dir=training_args.output_dir)


if __name__ == "__main__":
    train()