Wassim Jaoui

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New activity in zhihan1996/DNABERT-2-117M 8 months ago

Extract attention from model

1

#15 opened 11 months ago by

kaustabanv

how do I output the attention scores from the last layer of the encoder?

1

#22 opened 9 months ago by

jkb0722

A modified DNABERT2 that returns the attention too

#24 opened 8 months ago by

jaandoui

New activity in zhihan1996/DNABERT-2-117M 10 months ago

Tokenization of more than 2 sequences

1

#21 opened 10 months ago by

jaandoui

New activity in zhihan1996/DNABERT-2-117M about 1 year ago

Despite multiple trials and examining the model configuration, it seems that the model hosted on Hugging Face (`huggingface.co`) cannot handle sequences that exceed a length of 512 tokens.

2

#3 opened over 1 year ago by

hengchuangyin

error on inference using DNABERT2 - can you please share the environment you used for running it?

2

#12 opened about 1 year ago by

NettaB